| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1324 |
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| Symbol | |
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| ID | 8414209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1487158 |
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| End bp | 1488459 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022921 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003180339 |
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| Protein GI | 257785122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0634382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00226936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTCTTGG TCCTTTTTGC CTGTGTATTG CTGGGTTTGC TTTCTTGGAG TGTCGTAACA
GACAATCTGT TTGCCGCTCT TGTTGCGGGC GGAGGACTTG CCACGGTCAT TGTTCTTGGC
GGTACTACTC AGCCTGGTAA TGAACATACT AGATCTCAAG AAACAGAACG CACACTTGAG
GTTGCGTCAA AGACGCTTAA GACTTTACGT GGTGGATTGT CACAAGAAAC AGCACCAACT
ATCTGTACTT TATTGCTTTC AGAAACTTCA GCTGCCGCTA TCTCTATTAC CGATACGGAG
TACGTATTGG GTTTTGAGGG AGATATTGCA ACTGCACATG TACCTGGATC AAAAGTTGTT
GGTCCTGCAA CTGAGGTTTT GGAAAGTGGG CGCATGGAGA CGTTTGTCTC GGTTGACAGT
CGCCAGCAGG TGCTAAAAAG GCGAGGTGGT TTTGGAAATG GTGGCAGTTC CTTTGGCATT
ATTGTTCCGT TGATTGTTCA GGATCGCCCT GTCGGAACCA TCAAACTGTA TTATCGCCGC
GGTATTGAAA TTGATCGCAC GCAGTTGGCA ATCGCTGAGG GCTTGGGTGA GCTTCTCTCC
ACACAACTTT CATCTTACGA GCTTGATCGT CAGGCAGAAC TGACCGCTCG GGCCGAGGTC
AAAGCCTTGC AGGCTCAAAT TAATCCGCAT TTCCTGTTTA ATACGCTCAA TACCATTGCA
TCTCTTACGC GTACAAATCC TAATAAGGCA CGAGACTTGC TTCGTGAGTT TTCTGTGTTT
TATCGTCGCA CACTTGAGAG TTCTCAAGGC TCGCTCATTC CGCTTTCTCA GGAATTGACA
CAAACACGCA GGTATTTGAC AATTGAAAAA GCCCGTTTTG GAGAAGAACG TATCCAGGAG
TCTGAGCATG TTGACGAGGG ATGCGAAGAC ATTCAGGTCC CGTCTTTTTT GATTCAGCCT
ATTGTTGAGA ATGCAGTGAG GCATGCCATG AAAGATGAAG GCGCACTCCA TATTGACATC
CACGTCGCAC GCGACGAAGA TGATATTCTT ATATCTGTTG CTGATGATGG TCTTGGAATG
GATGAAGAGA CTGTTTCTCG CTTGCTTAAT GGTCAAGGCC CTACTCCGCA CAATTCTTCG
GGGAGAAGTG AAGGTACGGG TATTGCCATT AAGAACGTAG CTGAGCGAGC TGAGCGCTTC
TACGCTGCTG GATCTGGCAT GGAAATCATG TCTAAGCCAG GTCAGGGCAC GTGCGTGACA
CTCAAGCTTG CAGGTGCGGC ACTGCAGGTA ACAGCACAGT AG
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| Protein sequence | MVLVLFACVL LGLLSWSVVT DNLFAALVAG GGLATVIVLG GTTQPGNEHT RSQETERTLE
VASKTLKTLR GGLSQETAPT ICTLLLSETS AAAISITDTE YVLGFEGDIA TAHVPGSKVV
GPATEVLESG RMETFVSVDS RQQVLKRRGG FGNGGSSFGI IVPLIVQDRP VGTIKLYYRR
GIEIDRTQLA IAEGLGELLS TQLSSYELDR QAELTARAEV KALQAQINPH FLFNTLNTIA
SLTRTNPNKA RDLLREFSVF YRRTLESSQG SLIPLSQELT QTRRYLTIEK ARFGEERIQE
SEHVDEGCED IQVPSFLIQP IVENAVRHAM KDEGALHIDI HVARDEDDIL ISVADDGLGM
DEETVSRLLN GQGPTPHNSS GRSEGTGIAI KNVAERAERF YAAGSGMEIM SKPGQGTCVT
LKLAGAALQV TAQ
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