| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1317 |
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| Symbol | |
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| ID | 8414202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1481463 |
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| End bp | 1481894 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022914 |
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| Product | PTS system fructose subfamily IIA component |
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| Protein accession | YP_003180332 |
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| Protein GI | 257785115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.358134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTATC TTTTGCTTGT AAGTCACGGA ACTTTTGCGC CAGGTTTACA TAGCGTAATG
GACATGTTAA TGGGGCCAAG AGAAGACATT TTAAGCTATA GCATGGAAGA TGGTGTTGGA
GCAGGTGAGT ATGTCAAGAA TTTGTCAAAA ATTCTTGAGC CACTTACTGC TGACGATGAG
GTTGTTGTTC TTGGAGACAT CATCGGTGGT TCTCCACTTA CTAATGCACT TGATCTTCTC
GCTAAAAAAG GTCTGCTATC CCATACGGTA GCTTTTAGTG GTGCCAATCT TCCAATGGCA
ATTGGTGCTC TGATGGCAAT AGATGATGGT CTGAGTGGTG AAGCTCTTGT TTCATCTATT
TTGGATGAAG GAAAAAATGG AGTTAATCAG ATTGTCCTTG CTCTTGACGA TGAGGATGAA
GAAGATCTTT AG
|
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| Protein sequence | MKYLLLVSHG TFAPGLHSVM DMLMGPREDI LSYSMEDGVG AGEYVKNLSK ILEPLTADDE
VVVLGDIIGG SPLTNALDLL AKKGLLSHTV AFSGANLPMA IGALMAIDDG LSGEALVSSI
LDEGKNGVNQ IVLALDDEDE EDL
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