| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1315 |
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| Symbol | |
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| ID | 8414200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1480028 |
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| End bp | 1480894 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022912 |
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| Product | phosphotransferase system PTS sorbose-specific IIC subunit |
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| Protein accession | YP_003180330 |
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| Protein GI | 257785113 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.906394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.28147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTA ATGCGTTTCA AGCTGCCCTT TTGGGTTTGT TTGCATGCCT TGCGTCACTG
CCTGGTATGG GTGGCACTAC CGTAGGTAAC TATACTCTCG GTCGTCCACT TGTTGCAGGT
CTTGTCGTTG GCGTCATTCT TGGTGATGTT CAGACTGGCA TTATTGTTGG CGCAGCTATT
CAGCTGGTCT ATATTGCACT TGTAACTCCT GGCGGAACTG TCTCCGCTGA TGTTCGTGCA
GTTTCCTACA TCGGCATTCC TCTAGCAATT CTTGCAATCA AGGCTTATGG TCTTGATCCA
AGTTCTGTTG AGGCTGCATC CCAGGCAGCT GCTATTGGCG CCGCTGTTGG TACGCTTGGT
ACCGTTTTGT TCTATGGCAC TGCTACCATG AACCTTGTAT GGCAGGGTAT TGGTTGGCGT
GCAATGGAGA CCAAGGAGTG GGGTCGTATC AAGAAGACCA TTCCAATGGT TGACTTTGTA
TTCCCTTGGG TTTCTCACAT TATTTTCTCG TTCATTCCAA CATTCTTTAT TTGCATGGCT
GGCGAGAGCA TGGTCGGCGT CATGAAGGAA TACCTTCCTA TGAACGGCAT TCCAATGATG
ACCCTCTTCA CTGTTGGTAC CCTTCTTCCT ACTGTTGGTG TTGCAATTCT GTGCAAGCAG
GTTATTACTA AGCCTCTTGA TTGGGTAACT TTTGCCTTTG GCTTTATCCT TGCTGGTGCA
CTTGGCCTGA ACCTCATTGT CTCTGCAGTT GTAGCAGTCT TCTTCGCTGT TCTTAACTAC
CAGCTTCAGC AGGCAAAAAA TGTTCGTTTG GCCGCTGCAG CATCAGGCAA TGTAAGCGCA
GACGATGAAG AAGAGGAGGA TATTTAA
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| Protein sequence | MAINAFQAAL LGLFACLASL PGMGGTTVGN YTLGRPLVAG LVVGVILGDV QTGIIVGAAI
QLVYIALVTP GGTVSADVRA VSYIGIPLAI LAIKAYGLDP SSVEAASQAA AIGAAVGTLG
TVLFYGTATM NLVWQGIGWR AMETKEWGRI KKTIPMVDFV FPWVSHIIFS FIPTFFICMA
GESMVGVMKE YLPMNGIPMM TLFTVGTLLP TVGVAILCKQ VITKPLDWVT FAFGFILAGA
LGLNLIVSAV VAVFFAVLNY QLQQAKNVRL AAAASGNVSA DDEEEEDI
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