| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1314 |
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| Symbol | |
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| ID | 8414199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1479207 |
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| End bp | 1480025 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022911 |
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| Product | PTS system mannose/fructose/sorbose family IID component |
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| Protein accession | YP_003180329 |
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| Protein GI | 257785112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.174482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AGAAAACCAT TTCTCAGAAA GCACGTAATA AGTCTTTCTT GAGCTGGATT
TACGGCAATC TTACCTGCTT CTCTCAGGAG CACATGCAGA CATTCGGTTA TCTTGCATCT
ATGCTTCCAA TCGTTGACGA GCTTTACGAT ACTGATGACC AAAAGGTTGA GGCTCTTTCT
ACCTATACAA CCTTCTTCAA TACTGAGCCA CAGATTGGTT CTATGGTTGT TGGCTTGACT
GCTTCTTTGG AAGAGGCTCG TGCAAACGGT GAGGCAATTG ACGACGAGAC CATCAACGGT
CTTCGCGCTG GCCTTATGGG CCCTCTTGCT GGTCTTGGTG ATTCCATTAT CGTTGGTACT
TTCATTCCAA TTCTTCTTGG AATTGCACTT GGCCTTTCTA AGGGCGGCTC CGTTCTTGGC
CCACTGTTCT ATGTTGTGGT CTGGAACCTC ATTATGTACT TCGGCATGAA GTTTGCTTAT
AACCAGGGCT ATAGTCTCGG TTCTTCTGCT GTTGAGGCAC TTGTTGGTCC CGAATCTGAG
GCTCTCCGTA GCTCCATCGT TATGATTGGT ACTATGGTTA TTGGCTCGGT TGCCGCTACA
TGGATCAATG TCACAACTTC TCTGAATATT GCTGGTGTTG ACATTCAAAC AACACTTAAC
GGCATTTTCC CTAAGGTATT GAATCTTCTG TTTGTATACC TTTGCTGGTG GTTGATGACT
AAGAAGAAGC TCAGCCCAAC GGTTGTTATG CTTATTCTTG TTGTTGTAGC ACTTGTTGGC
GTTGTTCTTG GCGTCTTCAA CCCAGGTCTG TCTTACTAA
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| Protein sequence | MAEKKTISQK ARNKSFLSWI YGNLTCFSQE HMQTFGYLAS MLPIVDELYD TDDQKVEALS
TYTTFFNTEP QIGSMVVGLT ASLEEARANG EAIDDETING LRAGLMGPLA GLGDSIIVGT
FIPILLGIAL GLSKGGSVLG PLFYVVVWNL IMYFGMKFAY NQGYSLGSSA VEALVGPESE
ALRSSIVMIG TMVIGSVAAT WINVTTSLNI AGVDIQTTLN GIFPKVLNLL FVYLCWWLMT
KKKLSPTVVM LILVVVALVG VVLGVFNPGL SY
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