| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1307 |
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| Symbol | |
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| ID | 8414191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1472664 |
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| End bp | 1473128 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022903 |
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| Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
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| Protein accession | YP_003180322 |
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| Protein GI | 257785105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.833866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.257706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATTG CAGTTGGCTC TGATCACGCT GGCTTTATCC AGAAAGATCC TATTATTGAG
CACATTAAGT CGCTTGGTCA CGAGGTTTTG GACTTTGGTC CAGCAAATGA TGACCGTGTT
GATTACCCTG ATTTTGCAGA TAAGGTTGCT CGTGCAGTTG CAGCGGGTAA GGCTGATCGT
GGTGTTCTGA TTTGCGGCAC CGGCATTGGC ATTGCCATGA CCGCTGATAA AGTTCCTGGT
ATTCGCGCAA CTCCTGTTCA GACTGTTCAG TTTGCAGAGC TTGCTCGTGA ACATAACAAT
GCAAACGTCA TTGGCCTTTC TGGCCGATTC ACCGATCTTG CTGTTAACGA GGCTATTGTG
GATACCTTCC TAAGCACCGA GTTTGCAGGC GGCCGCCATA CTGGACGTGT CGAGAAGATT
ATGCGTGAGG ATGACCCTAA CTTTAAGGGT GTTGATGCTG AGTAA
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| Protein sequence | MRIAVGSDHA GFIQKDPIIE HIKSLGHEVL DFGPANDDRV DYPDFADKVA RAVAAGKADR
GVLICGTGIG IAMTADKVPG IRATPVQTVQ FAELAREHNN ANVIGLSGRF TDLAVNEAIV
DTFLSTEFAG GRHTGRVEKI MREDDPNFKG VDAE
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