Gene Apar_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1298 
Symbol 
ID8414182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1465062 
End bp1466543 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content51% 
IMG OID645022894 
ProductATP synthase F1, beta subunit 
Protein accessionYP_003180313 
Protein GI257785096 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.713648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA TGCAAGTAGA GACTTCTTCC TTTGAGGAAG CTGTTCTCAA CAAGCGCAAT 
CAGCGCGTTG ACGATGGCGT AATCGTTCGC GTAGTTGGAC CAGTTGTCGA CGTTAAGTTC
GACGGACCTG TTCCAAGCAT CTATACCGCA CTGACGGTAG AGGATGACAC GCCTGTTGGT
CACGTCAGCA CTGTTCTTGA GGTTGAGTCT CAGCTTCACG GTGGTGTTGT TCGTACCGTC
GCTATGTCGT CAACCGATGG TCTTCAGCGT AATCTTCGCG TTAAGGATAC CGGCAAGCCA
ATGATGATGC CAGTAGGCAA GTCTACGCTG GGCCGTGTCT GGAACGTCAT GGGTCAGCCA
GTTGATGGTG GAGAAATTCC TGAAGACGTT GAGTATTATC CAATTCACCA CCCAGCACCT
CTTTTCGAAG AGCTCACTAC TGAGACAGAA ATTTTTGAGA CAGGCATCAA GGCAATCGAT
CTTCTCGAGC CTTATGTTCG AGGCGGAAAG ACTGGCCTCT TTGGCGGCGC TGGTGTTGGT
AAGACCGTTT TGATTCAGGA GCTTATTAAC AACCTAGCTC AACAGCATGG TGGTACCTCC
GTATTCACCG GCGTTGGAGA GCGTACTCGT GAGGGTACTG ACCTCTTCCT TGAGATGACT
GAGTCTGGCG TTATTAACAA GACTTGCCTA GTCTACGGTC AGATGAACGA GCCACCAGGA
GCTCGTATGC GTGTTGCTCT TGCAGGCCTT ACTACTGCAG AGTACTTCCG CGATCAGGGC
CAGGACGTTC TGTTGTTCAT CGACAACATC TTCCGCTTCT CTCAGGCAGG TTCTGAGGTT
TCCGCACTTC TTGGTCGTAT GCCTTCTGCA GTTGGTTATC AGCCAACTCT GGCTACAGAG
ATGGGCGAGC TTCAGGAGCG TATTACTTCC ACCAAGGAAG GCTCTATTAC TTCCGTACAG
GCAGTTTACG TCCCTGCAGA CGACCTTACT GACCCTGCTC CTGCTACAAC CTTTACGCAC
TTGGATGCAA CTACCGTTCT TTCTCGTGCT ATTACTGAGC TTGGTATTTA CCCAGCAGTT
GATCCTCTGG CCAGCTCTAG TTCTGCTCTT GATCCATCCA TTGTTGGCGA AGAGCATTAC
CGCGTTGCTA TGGCAGTTCA GGAGACTCTG CAGGAGTACT CTGACCTTCA AGACATCATT
GCAATTCTGG GTATGGACGA GCTTTCTGAG GAGCAGCAGC GTACTGTTGC TCGCGCCCGT
AAGATTCAGC AGTTCCTCTC TCAGTCATTC CACGTTGCCG AGAAGTTCAC TGGCAACCCT
GGCGTATATT GCACCGTTGA GGAAACTGTT CGCTCGTTTG CAGAGATTAT TGATGGTAAG
TGTGATGACC TACCTGAGCA GGCATTCCGT TTTGCAGGCA CCATCGAAGA TGTTCGTGAG
CGTGCTGCAA AGATGTCAGC TTCAGATAGC TCACAGAACT AG
 
Protein sequence
MSDMQVETSS FEEAVLNKRN QRVDDGVIVR VVGPVVDVKF DGPVPSIYTA LTVEDDTPVG 
HVSTVLEVES QLHGGVVRTV AMSSTDGLQR NLRVKDTGKP MMMPVGKSTL GRVWNVMGQP
VDGGEIPEDV EYYPIHHPAP LFEELTTETE IFETGIKAID LLEPYVRGGK TGLFGGAGVG
KTVLIQELIN NLAQQHGGTS VFTGVGERTR EGTDLFLEMT ESGVINKTCL VYGQMNEPPG
ARMRVALAGL TTAEYFRDQG QDVLLFIDNI FRFSQAGSEV SALLGRMPSA VGYQPTLATE
MGELQERITS TKEGSITSVQ AVYVPADDLT DPAPATTFTH LDATTVLSRA ITELGIYPAV
DPLASSSSAL DPSIVGEEHY RVAMAVQETL QEYSDLQDII AILGMDELSE EQQRTVARAR
KIQQFLSQSF HVAEKFTGNP GVYCTVEETV RSFAEIIDGK CDDLPEQAFR FAGTIEDVRE
RAAKMSASDS SQN