Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1298 |
Symbol | |
ID | 8414182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1465062 |
End bp | 1466543 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645022894 |
Product | ATP synthase F1, beta subunit |
Protein accession | YP_003180313 |
Protein GI | 257785096 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.713648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATA TGCAAGTAGA GACTTCTTCC TTTGAGGAAG CTGTTCTCAA CAAGCGCAAT CAGCGCGTTG ACGATGGCGT AATCGTTCGC GTAGTTGGAC CAGTTGTCGA CGTTAAGTTC GACGGACCTG TTCCAAGCAT CTATACCGCA CTGACGGTAG AGGATGACAC GCCTGTTGGT CACGTCAGCA CTGTTCTTGA GGTTGAGTCT CAGCTTCACG GTGGTGTTGT TCGTACCGTC GCTATGTCGT CAACCGATGG TCTTCAGCGT AATCTTCGCG TTAAGGATAC CGGCAAGCCA ATGATGATGC CAGTAGGCAA GTCTACGCTG GGCCGTGTCT GGAACGTCAT GGGTCAGCCA GTTGATGGTG GAGAAATTCC TGAAGACGTT GAGTATTATC CAATTCACCA CCCAGCACCT CTTTTCGAAG AGCTCACTAC TGAGACAGAA ATTTTTGAGA CAGGCATCAA GGCAATCGAT CTTCTCGAGC CTTATGTTCG AGGCGGAAAG ACTGGCCTCT TTGGCGGCGC TGGTGTTGGT AAGACCGTTT TGATTCAGGA GCTTATTAAC AACCTAGCTC AACAGCATGG TGGTACCTCC GTATTCACCG GCGTTGGAGA GCGTACTCGT GAGGGTACTG ACCTCTTCCT TGAGATGACT GAGTCTGGCG TTATTAACAA GACTTGCCTA GTCTACGGTC AGATGAACGA GCCACCAGGA GCTCGTATGC GTGTTGCTCT TGCAGGCCTT ACTACTGCAG AGTACTTCCG CGATCAGGGC CAGGACGTTC TGTTGTTCAT CGACAACATC TTCCGCTTCT CTCAGGCAGG TTCTGAGGTT TCCGCACTTC TTGGTCGTAT GCCTTCTGCA GTTGGTTATC AGCCAACTCT GGCTACAGAG ATGGGCGAGC TTCAGGAGCG TATTACTTCC ACCAAGGAAG GCTCTATTAC TTCCGTACAG GCAGTTTACG TCCCTGCAGA CGACCTTACT GACCCTGCTC CTGCTACAAC CTTTACGCAC TTGGATGCAA CTACCGTTCT TTCTCGTGCT ATTACTGAGC TTGGTATTTA CCCAGCAGTT GATCCTCTGG CCAGCTCTAG TTCTGCTCTT GATCCATCCA TTGTTGGCGA AGAGCATTAC CGCGTTGCTA TGGCAGTTCA GGAGACTCTG CAGGAGTACT CTGACCTTCA AGACATCATT GCAATTCTGG GTATGGACGA GCTTTCTGAG GAGCAGCAGC GTACTGTTGC TCGCGCCCGT AAGATTCAGC AGTTCCTCTC TCAGTCATTC CACGTTGCCG AGAAGTTCAC TGGCAACCCT GGCGTATATT GCACCGTTGA GGAAACTGTT CGCTCGTTTG CAGAGATTAT TGATGGTAAG TGTGATGACC TACCTGAGCA GGCATTCCGT TTTGCAGGCA CCATCGAAGA TGTTCGTGAG CGTGCTGCAA AGATGTCAGC TTCAGATAGC TCACAGAACT AG
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Protein sequence | MSDMQVETSS FEEAVLNKRN QRVDDGVIVR VVGPVVDVKF DGPVPSIYTA LTVEDDTPVG HVSTVLEVES QLHGGVVRTV AMSSTDGLQR NLRVKDTGKP MMMPVGKSTL GRVWNVMGQP VDGGEIPEDV EYYPIHHPAP LFEELTTETE IFETGIKAID LLEPYVRGGK TGLFGGAGVG KTVLIQELIN NLAQQHGGTS VFTGVGERTR EGTDLFLEMT ESGVINKTCL VYGQMNEPPG ARMRVALAGL TTAEYFRDQG QDVLLFIDNI FRFSQAGSEV SALLGRMPSA VGYQPTLATE MGELQERITS TKEGSITSVQ AVYVPADDLT DPAPATTFTH LDATTVLSRA ITELGIYPAV DPLASSSSAL DPSIVGEEHY RVAMAVQETL QEYSDLQDII AILGMDELSE EQQRTVARAR KIQQFLSQSF HVAEKFTGNP GVYCTVEETV RSFAEIIDGK CDDLPEQAFR FAGTIEDVRE RAAKMSASDS SQN
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