| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1288 |
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| Symbol | |
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| ID | 8414168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1445345 |
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| End bp | 1446226 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022880 |
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| Product | protein of unknown function DUF161 |
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| Protein accession | YP_003180303 |
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| Protein GI | 257785086 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1284] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACAAT CTACTTGGCA AAAGTCCTTT AAAGATTCGT TCTTTATCGT TCTTGGCTGT
GCAATTTTTG CAGTTGGTCT TGATGTATTT GAAGTTCCTA ACGGACTTGC GGCTGGCGGT
ATTACTGGTT TTGCAACAGT TATTAGGGCT ATTGCACTGC CCTTTGGATT TGACCTGCCA
GTTGGTATGC AGACAATTGC CATGAATATT ATTTTGATGG CTTTTGTTGC AAAAAGTGGG
AACAAAAAAT ACTTGCTCAA GAGTGTTGTA GGCTTCTTGA TCTCCAGTAT TTTTGTTGAT
CTTTTTGCGC CATTTTTACC AGTACTTGGC GCCAATGATC TTATGCTTGC AGCTTTGTGG
GGTAGTATTA TCTGCGGCTT TGGTCTTGGT CTTGTATTTA GGGCGGGCGG AAATACCGGC
GGTACAGACA TTATTGCTCA AGCAGTTTCT AAGCGTTTTT CTATTCCATC AGGTACTGCA
ATTATTATTG TTGATATTGT CATTATTATT GCGGCTATTC CGGTCTTCTC GCTAGAAAAC
GGACTGTATT CTGCTTTGGC AATCTTTGTT ACAGGTAAAA TGATTGACTT TGTCATTGAT
GGACCAAGGT CGGAGCGCTG CGTTTACATT ATTTCTTCTG AGCACGATGC AATTGCTCAT
GAGATTCTAT ACAACCTCAA TCGTGGCTGT ACAGAGCTTC AGGCGCGTGG ACTGTGGAGC
GGCGCGCGTA AGCCTGTTTT AATGTGTGTT CTTGGTCGTA CAGAGCTTGT GCAGTTGAAA
GTCATTGTTT CTGAGATTGA CCCAGATGCA TTGGTATTTA TTTCAGAAGT ACACGAGGCA
ATTGGCGAAG GATTTAAATC ATTTGAGGCT TTGGAAGGCT AG
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| Protein sequence | MQQSTWQKSF KDSFFIVLGC AIFAVGLDVF EVPNGLAAGG ITGFATVIRA IALPFGFDLP
VGMQTIAMNI ILMAFVAKSG NKKYLLKSVV GFLISSIFVD LFAPFLPVLG ANDLMLAALW
GSIICGFGLG LVFRAGGNTG GTDIIAQAVS KRFSIPSGTA IIIVDIVIII AAIPVFSLEN
GLYSALAIFV TGKMIDFVID GPRSERCVYI ISSEHDAIAH EILYNLNRGC TELQARGLWS
GARKPVLMCV LGRTELVQLK VIVSEIDPDA LVFISEVHEA IGEGFKSFEA LEG
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