| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1287 |
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| Symbol | |
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| ID | 8414167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1444405 |
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| End bp | 1445187 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022879 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003180302 |
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| Protein GI | 257785085 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGGA GCAAGGCTTA CGTTGATTCA CGTCGCGAGG CAATTACTGA GTTGCTAGAA
AAAAGAGGTC AGGCAAGCGT TCAAGAACTT GCAGACCACT TTGAAGTCTC TTCTTTAACT
ATTAGGCGTG ACCTGGATTT TCTTGAGAAA CGCGGCATCT TAACTCGTCA ATATGGCATT
GCTACTCTGC TTAATCCTTA TGGTCGCCCT TCTGGCTCAA GGCAAATTCG TTCTAACAAA
GCAATTGCAC GTGAAGCGGC CCGTTACGTT GAAGATGGTG ATTGTATCTT TATCAACACA
AGCTCCGTTG CTCTGGGCAT GCTTGAGTGG ATTGACGCTC ACGACGTAAC CGTTGTTACT
AACAATGGCA AGGCTCTACT GCTTGAAGAT ATCCGCGACC TTTCGATCAT TCTTACTGGT
GGCGATATCC GTCCTCCACG TGCTTCCATG ACTGGCGAAA CCGCTCTTGA TTGCATCCAG
CGCATTACTG CCGCTAAATG CTTCTTGGGC TGCACGGGCT TCTCGGGAGA ATTTGGCCTT
ACCTCTGCAA CATCCCCTGA GCCAGCAATT AACGCTCAGA TGCTAAAGCG CTCTAGAAAA
CACTATATTG TTGCCGATTC TTCTAAACTG GGCACCACTT CTAACTTCCA GTTTGGCTCT
GCAGAGGACA TTGACCTTCT GATTACCGAT ACAGGAGCAA CTGACGAGCA GATTAAAGAG
CTCAAAGCTG CAGGCCTTAA GGATGTCGTC TGCGTCACTC CTTCAATTCT TCCCGCTAAG
TAA
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| Protein sequence | MKRSKAYVDS RREAITELLE KRGQASVQEL ADHFEVSSLT IRRDLDFLEK RGILTRQYGI
ATLLNPYGRP SGSRQIRSNK AIAREAARYV EDGDCIFINT SSVALGMLEW IDAHDVTVVT
NNGKALLLED IRDLSIILTG GDIRPPRASM TGETALDCIQ RITAAKCFLG CTGFSGEFGL
TSATSPEPAI NAQMLKRSRK HYIVADSSKL GTTSNFQFGS AEDIDLLITD TGATDEQIKE
LKAAGLKDVV CVTPSILPAK
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