| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1284 |
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| Symbol | |
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| ID | 8414164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1441805 |
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| End bp | 1443112 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022876 |
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| Product | putative sugar-specific permease SgaT/UlaA |
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| Protein accession | YP_003180299 |
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| Protein GI | 257785082 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.788956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATG CAATTCTCAT GCAGCTCAGA GATACAGCCG TTATTATGGG CATTATTGCT
CTTGTCGGTC TCTTGCTGCA GAAGAAGTCC GCTGTGGACG TCTTCTCCGG AACTGTGAAG
ACCATTATTG GCTTCATGAT CTTCAACATT GGCTCTAGCG CTATGTCCGC TCAGGTCAAC
ATCTTCAGTG ATATGTTTAG TCGTGCGTTC GCTGTTAAGG GTGTTGTAAC CCAGGTTGAG
GTCGCAACTG CTCTTGCACT GAACACCTAT GGTACTGAGG TTGCTCTTGT AATGGTCCTT
GGCTTTATCA TGAATCTTGT GTTTGCTAAG GTCACCCCAT TCAAGTCCGT CTTCTTGACT
GGCCAGCACT TCCTGTACTT CTCCTGCGTA CTTGCGCTAG TCTTCATTGC TCTTGGCCTC
CCAATGTGGG TTACCATTGT TCTTGGTGGC GTCATTCTCG GCTTCTGTGG TGCTGCACTG
CCTTCGCTGT GCCAGCCATT TGTAACTAAG CTTGTTGGTG GAGATTCCAT CGCAATTGGC
CACTTCAACT GCATCGGTTA TGCATTCTCC GGTTACGTTG GAAAACTCTT CGCCAAGAAG
AACGAGAAGG ACAGTGAGAA AGAGGCTAAG GAGCTCCCAG AGTTCTTTAA GCTCTTCAAG
GACTTTGTCT TCTCCGTTGC TCTCTTCATG ATTGTTCTAT TCTATGTTGT TACTATTGCA
TGCCTTGTCA CCGGTCACTT TGGTGACACT CTTGCAAACA ACAAGCCATT CACTAGCTAC
TTTGGCAACG ATATGTGGTG GATTTGGCCA TTCCTTGCTG GTCTTCAGTT TGCTGCTGGC
ATGTCCGTTC TTGTTTACGG TGTTCGCCAG TTCATCGCTG AGATTACCGC TGCATTTGTC
GGCATCTCTG AGAAGCTCAT TCCAGATGCA CGTCCTGCAG TCGACTGCCC TGCAATCTTC
CCATTTGCAC CAAACGCTGT CATCATCGGC TTCATTGGAT CCTTCCTTGG CGGCCTTGTA
GCAATGGCAC TTATGGTTGC GTTCCACAGC CCAACCATCA TGATTCCTGC AGCAGGCATC
TGCTTCTTCT CTGGTGGTAC TTGTGGTGTT TGTGGTTACG CTTACGGTGG ATGGCGTGGC
GCTCTTCTTG GTTCCTTCTT GGTTGGCATT TTCCTGACCG CTGGTCCTCT GATTCTCTAT
CCTGCATTTG CTCAGCTGGG AATTGCAGAG GCATCCTTCC CTAATGTTGA CTACAACATC
GTTGGTTCTA TCATCTACGG CATCGGCTCT CTCTTTGGTC TTGCCTAA
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| Protein sequence | MLNAILMQLR DTAVIMGIIA LVGLLLQKKS AVDVFSGTVK TIIGFMIFNI GSSAMSAQVN
IFSDMFSRAF AVKGVVTQVE VATALALNTY GTEVALVMVL GFIMNLVFAK VTPFKSVFLT
GQHFLYFSCV LALVFIALGL PMWVTIVLGG VILGFCGAAL PSLCQPFVTK LVGGDSIAIG
HFNCIGYAFS GYVGKLFAKK NEKDSEKEAK ELPEFFKLFK DFVFSVALFM IVLFYVVTIA
CLVTGHFGDT LANNKPFTSY FGNDMWWIWP FLAGLQFAAG MSVLVYGVRQ FIAEITAAFV
GISEKLIPDA RPAVDCPAIF PFAPNAVIIG FIGSFLGGLV AMALMVAFHS PTIMIPAAGI
CFFSGGTCGV CGYAYGGWRG ALLGSFLVGI FLTAGPLILY PAFAQLGIAE ASFPNVDYNI
VGSIIYGIGS LFGLA
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