| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1280 |
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| Symbol | |
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| ID | 8414160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1438783 |
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| End bp | 1439433 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022872 |
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| Product | KDPG and KHG aldolase |
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| Protein accession | YP_003180295 |
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| Protein GI | 257785078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.080888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATGC AAAAAGCTGC TGTCTCTCAG GCATTGGTTG ATACCTGTGC GTTTGCAGTT
GTTCGCGTCC CAACGGTTGA GCGTGGCATT GAAATTGCTG AAGGTCTTGC AGAAGGTGGT
ATTCATGCAA TGGAGATCAG CTACACCCTG CCAAATGCAG GCGAGGTCAT TGCTGCAATT
AGAGAGCGTC TTGGTGACAA GATGATTGTT GGTGCAGGTA CCGTTATGGA GCCAACAACT
GCTCGTCTTG CTATTATGGC TGGCGCACAG TTCATTGTTG CAAACTGTGG CTCTGACGAG
GTTGCTCGTA TGTGCAATCT ATATCAGATT CCTTACGCTC CCGGTTGCAC TACTATGACT
GAAGCAAATC ATAGCCTTGA GATGGGAGCT GCATTTATTA AGTGCTTCCC AATTTCTAAT
GTCTATGGTT CTGAGCTGGT TAACCTCTTC AAAACACCAA CCCCTTGGAT GCCTTTGATG
GCTTCTGGTG GTATTAATCT TGATAACCTT TCTGAGTGGC TTGAGCGTGG TGTTGACTGC
TGCGGCATGG GAAGCTTGCT TACTAAGGGA ACAAAAGAGG AAATTGCAGC TAACGCAGCT
AAAGTTCGAG CTCTCATTGA TGAGACTCGT GCAAAGATGC AGGCTGTATA A
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| Protein sequence | MKMQKAAVSQ ALVDTCAFAV VRVPTVERGI EIAEGLAEGG IHAMEISYTL PNAGEVIAAI
RERLGDKMIV GAGTVMEPTT ARLAIMAGAQ FIVANCGSDE VARMCNLYQI PYAPGCTTMT
EANHSLEMGA AFIKCFPISN VYGSELVNLF KTPTPWMPLM ASGGINLDNL SEWLERGVDC
CGMGSLLTKG TKEEIAANAA KVRALIDETR AKMQAV
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