| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1277 |
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| Symbol | |
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| ID | 8414157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1435183 |
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| End bp | 1436031 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022869 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003180292 |
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| Protein GI | 257785075 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCA ACCTGCATAA ATTCCAAGCT TTTACTTCTG CGGCATATCA CAGTAGTTTT
ACGGTGGCTG CAGAAGAATT AGGATGTACT CAGTCATCAA TTAGCCGTAT GGTTGCAAGT
CTAGAAAAAG AATGGGACGT GCGTCTGTTT AACCGCCATG GTGGTTATGT CAGTCTTACA
CCTGAGGGAA AAACGCTTTT ACCAGTTGCA GAAGAGGTGT GCCAGGCATA TAGCAAGCTG
AGTAATCAAG TTAATCGCGT CAGCGCTATT GAAATGGGCA ATCTTGTTAT CGCTGCGCCT
TCCAGCTTTC TTTCGCGAGC ACTTCCAGGC TATCTCAAGA AGTACATGAC CGATCACCCA
AATATTAAAG TTGAAGTTAT TGAGTGTACT TATGGAGAAG CCCTTCGCCT TATTAGCAAG
GGTAAGGTGG ATATTAGTTT TACTATGACT CGTACAACCG AGCAGGGATT TACCTCAACT
TTATTTGATC ATGACGAAGT TATCGTTGTT TCTCAAAAAG GACATTACGA GAAGAACCTT
GAGACGATTC CTGTTAAGCG TCTTATTGAA GAGCCTTTTA TTGTTGATAT TGAGACAGCT
CCTTTGCTTC AGAAGCAACT TAAGAATGCG CGCATGACAT TTGCGTCATC GGATTCGTTC
ACCATAATGT CTATGGTAGA GTCAGGTCTT GGCGTAAGTT TGCTGCCACT TGAAGCAACA
AAAGGTACAA ATTTTGATAT TGATGTACAT CATCTTGAGA CTCCCGTACA TCGTAATGTT
TTTATTACAC ATCGTGTAAA AGGCGAGATG TCATGCACTA CAGAAGAGTT TTTAAAGTAT
TTAAGTTAA
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| Protein sequence | METNLHKFQA FTSAAYHSSF TVAAEELGCT QSSISRMVAS LEKEWDVRLF NRHGGYVSLT
PEGKTLLPVA EEVCQAYSKL SNQVNRVSAI EMGNLVIAAP SSFLSRALPG YLKKYMTDHP
NIKVEVIECT YGEALRLISK GKVDISFTMT RTTEQGFTST LFDHDEVIVV SQKGHYEKNL
ETIPVKRLIE EPFIVDIETA PLLQKQLKNA RMTFASSDSF TIMSMVESGL GVSLLPLEAT
KGTNFDIDVH HLETPVHRNV FITHRVKGEM SCTTEEFLKY LS
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