| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1270 |
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| Symbol | |
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| ID | 8414150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1427122 |
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| End bp | 1427814 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022862 |
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| Product | protein of unknown function DUF1275 |
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| Protein accession | YP_003180285 |
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| Protein GI | 257785068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3619] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCACG CACTACAAAT GTCAGATTCG GTAGAAGTTG CTGCATTTTT AGCCTTCTCG
GGCGGAGTTA TGGATGCTTA TTCCTACCTG GTGCGCGGCG GCGTTTTTGC TAATGCTCAG
ACAGGAAATT TGCTGCTATT GGGCATTAAT TTGACCAGCG GATCGTTTGA AAAATGTCTC
AAATACGCTC TGCCAGTTTT GGCATTTGCC ATAGGTATTG CGCTTTCGTA CGCTATTCGG
GCTATTGCGC GAGAAGAACA TCTGCACTGG AGACAGCTGG CGGTTATTGT AGAGATTGCG
CTCTTAAGCG TTGTTTCTCT GCTTCCAACA GACATGAACC TGCTGGCAAA TAGCCTGACT
TCGCTTGCGT GTGGCATTCA AGTTCAGGCG TTTAGAAAGC TGCATGGACA TGCGTTTGCT
ACTACTATGT GTATTGGTAA CCTTCGTGGT GGAACGCAAG AAATAGCAGC ATATATGCAC
ACGCATGAGC CTGTACATAT TGAGATTTCA CTACTTTATT TTGGAACTAT TTTCTGTTTT
GTATTTGGTG CAGTAATAGG TAACTTACTC ATTCCGCTTA TGGGCACTCA CATGATTTGG
CTTTCACCTG CGGCGCTCTT GGTAGTTATT CTGGTCATGT TTATTGATCG CGAGAAACAA
GTTCTAAAAG CTCATGGTAA ATCTGTAAAG TAA
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| Protein sequence | MKHALQMSDS VEVAAFLAFS GGVMDAYSYL VRGGVFANAQ TGNLLLLGIN LTSGSFEKCL
KYALPVLAFA IGIALSYAIR AIAREEHLHW RQLAVIVEIA LLSVVSLLPT DMNLLANSLT
SLACGIQVQA FRKLHGHAFA TTMCIGNLRG GTQEIAAYMH THEPVHIEIS LLYFGTIFCF
VFGAVIGNLL IPLMGTHMIW LSPAALLVVI LVMFIDREKQ VLKAHGKSVK
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