| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1268 |
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| Symbol | |
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| ID | 8414147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1424688 |
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| End bp | 1425554 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 645022859 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003180283 |
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| Protein GI | 257785066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAGGA ATGCTACAAG ATTTCAAAAA GTGCTGATGT CTTGGGTTTA TCGCGGTAAA
GAAATTTTTA AACCCCTTAA CACTGGTACT ATTGATGAGC ATGTTGCTTG CATTAGAGAG
TACGTTGCTA ATATCTTCTT TTATACAAAA AATAGTACAA CCATAATGAT TGATGCAGGA
TATAACTATG ATTATCTGCA AGAAAAGATG GTTTGGCTGG GAATAGATCC TCAGGATATT
CAACACATTT TAATTACTCA TCAAGATACT GATCATGTTG GTGCTATTGA AGCTGATAGT
AATCAGCTGT TTAGTCATGC TCGGGTTTAT ATTGGTGATA TTGAAAATAG ATATTTAACA
GGAGAAGTCC GTAGAAGAGT AATGAATGGC TGGTATAAAG TACCAAAAGT GACTATTCCA
AACAAAAAGA AACTTTTGCA TGATGGAGAA GTTTTTGAAA TTGGTGGCAT AAAAATTGAA
ACTATCTTAG TACCCGGTCA TACGTGGGGT CATGTGGTGT ACTTGATTGA TGATGAGTAT
TTATTCACCG GTGATACTAT CTGGTTTGGC GCAGATGGCG GCTATAGTTT TATTAACAAG
CTTGCAGAAG ATAATCAACT TGCTGTTGAA TCGCTTGCAA AACTAGAAAA AATTCTACGC
CAGAGAGAGC TCAATCCTAA AATTTTTACT GCTCACACAG GCTGGGCAGA TAGTCTTGAT
TTTGCCTTTG CTCATACTGA CGAGGTCTGT AACGCAAATA AACCTGTCAA GGTTCACGAC
CCCAAGGCTC CCTACGACGC ATATGATGAG CGTGATGACA CTCGTGAAAA TGCGGTTAGC
ATACCGCTTC TTCCATGTAA TCGATAG
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| Protein sequence | MSRNATRFQK VLMSWVYRGK EIFKPLNTGT IDEHVACIRE YVANIFFYTK NSTTIMIDAG
YNYDYLQEKM VWLGIDPQDI QHILITHQDT DHVGAIEADS NQLFSHARVY IGDIENRYLT
GEVRRRVMNG WYKVPKVTIP NKKKLLHDGE VFEIGGIKIE TILVPGHTWG HVVYLIDDEY
LFTGDTIWFG ADGGYSFINK LAEDNQLAVE SLAKLEKILR QRELNPKIFT AHTGWADSLD
FAFAHTDEVC NANKPVKVHD PKAPYDAYDE RDDTRENAVS IPLLPCNR
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