| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1266 |
|---|
| Symbol | |
|---|
| ID | 8414145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1422218 |
|---|
| End bp | 1423906 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645022857 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_003180281 |
|---|
| Protein GI | 257785064 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAC TTCTCATTAA TGGTAGCCCC AAGGGCAAGG CAAGTAATTC TCTTAGACTT
GCAAAGAGTT TTATTGAGGG TATCTCTGAA CAGCATAAAG ATAAAAACGT AACTATTGAA
CAACTTGATG TTGCTACCAT GGATATTAAG CCATGCAAAG GATGCTTTCA CTGCTGGAAG
AATACTCCAG GTCAGTGCAT TATGTCTGAT GATGAGAACA AAGTTATTCA GCAACAGCTT
TGGGCTGATC TGATTATTTG GAGCTTTCCT TTGTACTATT TCAACGTGCC TGGGATACTG
AAGAATCTTA TTGATCGCCA ACTTCCCATG AACCTTCCTT TTATGAGCGA TGCAAAGAGA
GGATACGGGA GCGGCGCTCA CGAGTCTCGC TACGACATGA CTGGAAAGAA GCACGTTTTA
ATTTCTACCT GTGGATTTTA TTCTGCAGAG GGTAATTATG ATAGCGTCTC TAGGATGTTT
GACCACATTC TTGGTCAAGG TAATTACGAG AGCATTTTCT GCGGACAGGG TGAGTTGTTC
CGTGTAAAGG AACTCTCTGC GCGCACTAAC CAGTATCTTG CGCTTGTTAA AAAGGCCGGC
GTAGAGTATG CACAGTACGG CATAACAGAG CAGACAAAAG CCGAGCTTGA AGTCTTGCTG
TATCCAAAAG AGATGTTTGA GCAGATGGCA GATGCAAGCT GGGGTATTTC TCGCGACGCA
AGTGTTCAAA GTAGCGGAAA AGCTGGCGAG AAACCCGTTG AGCAGGCTCC ACCTGATGCT
ATTTTTACTC GTCAGATGGC TGCACTGTAC AATAAGGATG CATATGATGG CAAAGACCGT
GTTGTTGAGA TGAACTACAC GGATCTTGGT CGTAGTTACC AGATTTTCTT GGGTAAAGAT
GGTAGTAAAG TTTTTAATGA TGGCAGTTTG ATTACTACTA CAAAACTTAA CACTCCATTT
GAGGTTTGGC AGTCCATCTC TAGAGGAGAA ATAAGTGGAC CAGAAGCGTT AGGCAAGCAT
TTATACACCG TTGAGGGAGA TTTTTCCTTC ATGATTGATT GGGATAAATA CTTTGGGCCA
ACTCCTGGTA GTTCGTCAGG AAATACGCAG AATACGCCAT CTAATGAAGT AAATAACAAG
CAAAAAAATC CTCAAATGAT TACGATGCTG CTCCCTTGGA TTGTTTTCTG GACTGCAACG
TCGTTTAATC CACAGATTGG TGCTATGGTT TCACTGCTTA TTACTACTTT GATGCCGCTT
ATTATGAGGA ATGTTAAATT CACCATTTGG GATAGAATTT CATTTGCTCT AGTTGGCATA
TTGTCTGTAG GCATATTTAT GAGCGGAAAC GGTGGCGTCA ACCTTATTGT CGATTTGGGA
TATCTGGCTT TTGGCCTTAT GTGGCTTGTG TCATGCATCA CCAAAGATCC TCTTTGCGCT
GTATACGTAA AATATAGCTA TGGAGGAGAT ATTGCCTACA ATAATCCGCT TTTTATGAAG
ACAAACTATA TTTTGGCTGT ATGTTGGGGT GCTATGTACG TATTAACTGC AATCTGGAGT
TGGCTTGCAG TTCAAAATGG AGTAGGCAGT ATTTTGGTTG TTGTAAACAA CTTGGTTCCC
ATTTGTATGG GCTTATTTAC CGCTTGGTTC CAAAAGTGGT ATCCAGCTAA GATGGCAAGT
GGAAAGTAA
|
|---|
| Protein sequence | MNVLLINGSP KGKASNSLRL AKSFIEGISE QHKDKNVTIE QLDVATMDIK PCKGCFHCWK
NTPGQCIMSD DENKVIQQQL WADLIIWSFP LYYFNVPGIL KNLIDRQLPM NLPFMSDAKR
GYGSGAHESR YDMTGKKHVL ISTCGFYSAE GNYDSVSRMF DHILGQGNYE SIFCGQGELF
RVKELSARTN QYLALVKKAG VEYAQYGITE QTKAELEVLL YPKEMFEQMA DASWGISRDA
SVQSSGKAGE KPVEQAPPDA IFTRQMAALY NKDAYDGKDR VVEMNYTDLG RSYQIFLGKD
GSKVFNDGSL ITTTKLNTPF EVWQSISRGE ISGPEALGKH LYTVEGDFSF MIDWDKYFGP
TPGSSSGNTQ NTPSNEVNNK QKNPQMITML LPWIVFWTAT SFNPQIGAMV SLLITTLMPL
IMRNVKFTIW DRISFALVGI LSVGIFMSGN GGVNLIVDLG YLAFGLMWLV SCITKDPLCA
VYVKYSYGGD IAYNNPLFMK TNYILAVCWG AMYVLTAIWS WLAVQNGVGS ILVVVNNLVP
ICMGLFTAWF QKWYPAKMAS GK
|
|---|
| |