| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1246 |
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| Symbol | |
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| ID | 8414125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1395274 |
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| End bp | 1396899 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645022838 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_003180262 |
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| Protein GI | 257785045 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCGG TATTAAATGT TGAGGACATC AAGCGCGTAG AGATTGCGCT GACACGCGTG
GGCGTAAGCG TTTCTGAGCT CATGCACCGT GCAGGTTACG CTGCTGCTCA AGAAGCCCTT
GGCATGGGGG GAGACATTAG TAACGTTGTC ATCCTCGTAG GTCTTGGCAA TAACGGTGGA
GATGGCTGGG TGGCAGCAGA AGCGCTGCGC TCTAGGAACT GCAACGTTAA GGTGGTTACT
CCACTTGAGC CAGATCAGAT TTCCGGCGAT CTTGCACGTC AAATGGCGCA GCGCGCCGTT
CGCGCGGGAG TTTCGGTGCT TGTTGGTCCT TCTCGCCAGG AGCTTATTGA TCTGTTGGCA
ACAGCTGATG TGGTGCTTGA CTGCATGTTG GGTACCGGTT TTCACGGCAA AGTGAGAGCT
CCGTTTGATA TTTGGATTGA GTGCCTTAAT CAGTCTGGCG CTCGCGTGCT CTCTGTTGAC
GTTCCAAGTG GTCTTTCTGC GCAGAAGGGC CAGGTAGAAA GTGCGTGTGT TGTTGCTGAC
GTCACCGTTA CCATGATTGC GCTGAAGCCC GGTCTAATTG CTGATGCTGG TCGAGATGTT
TGTGGTTCTA TTGTTGTAGC TCCTTTGGCC GAGCAGACGG AGCGCTTGGT TGTTGAAGCA
GATCCTGTTG CATGGCGCGT TGACTTGGAA GATTATCTTG CTTCTGTTCC TGCTCAGCTC
AACGACTGTG ATAAGTATTC TCGCGGCTCC GTACTGGTGG TTGGTGGCTC TAGCCGCTTC
CCGGGAGCCG CTGTTTTTGC TGCTAAGGCG GCTGCTCGTG CGGGTGCCGG CTACGTTACG
CTGGCAGTCC CCGAGGCTAT TGTCAGCTGT GTTCAGATGA TGTTGCCAGA GGTTCCTGTT
ATTGGCCTCC CATGCGATGC TGAGGGCGTG TTTACTGAGG AGGCCGCTCC ACTGGTGCTG
CAGCTTGCTG CGATGCGTAC CGTTACGCTG GTTGGTCCTG GCATGCGCGT TTCTGGTGGA
ACCGTTAAGG TTACCTCTGC ACTGCTTGAC TCTGAGCTGC CCGTTATTGT TGACGCTGAT
GCACTCAACT GTATTGCTCG CCTGACTAAC AACAACCTTC CAGATTTCCC CGAGCTCACT
CGTCGTACCG CTCCGCTTAT CATGACCCCA CATCGTCGTG AGCTTGGCCG CTTGGTCAAT
CAGGTAGACA ATCCTCCTGC AAGCCTGGTG GCTCAGCTTG AGGCAGCTCG TAAGATTGTC
TGGGCAGATG GTGGCTCTGA GCTGGTTATT GTTGCTAAGG GTACTGCTAC CGGCTGTGTA
GGCGTCCAGA AAGCCGTGCT GCCAAAGCCT GGCCCTGTCA CGTTGGCAAC CGCTGGTTCT
GGCGATGTTC TTGCTGGTAC CATTGCTGGC CGATTAGCTC AGGTTGCCGG CCAAGTTGAT
GACCTGACAA TCTTCTGCTC GCTTGCTTGT GAGGTTCATG CATACGCAGG CCAGCTAGCT
GCCGAGAAGT TCGGTGTACG TGGAGCTATG GCTGGTGACA TCTGCGATGT TATTGGCCTT
GCTTCAGATG CACTTGAGGA GCAAATTGCG TTCCCTATGG CAGACTTTGA AGAAGCTGCA
GAGTAG
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| Protein sequence | MQPVLNVEDI KRVEIALTRV GVSVSELMHR AGYAAAQEAL GMGGDISNVV ILVGLGNNGG
DGWVAAEALR SRNCNVKVVT PLEPDQISGD LARQMAQRAV RAGVSVLVGP SRQELIDLLA
TADVVLDCML GTGFHGKVRA PFDIWIECLN QSGARVLSVD VPSGLSAQKG QVESACVVAD
VTVTMIALKP GLIADAGRDV CGSIVVAPLA EQTERLVVEA DPVAWRVDLE DYLASVPAQL
NDCDKYSRGS VLVVGGSSRF PGAAVFAAKA AARAGAGYVT LAVPEAIVSC VQMMLPEVPV
IGLPCDAEGV FTEEAAPLVL QLAAMRTVTL VGPGMRVSGG TVKVTSALLD SELPVIVDAD
ALNCIARLTN NNLPDFPELT RRTAPLIMTP HRRELGRLVN QVDNPPASLV AQLEAARKIV
WADGGSELVI VAKGTATGCV GVQKAVLPKP GPVTLATAGS GDVLAGTIAG RLAQVAGQVD
DLTIFCSLAC EVHAYAGQLA AEKFGVRGAM AGDICDVIGL ASDALEEQIA FPMADFEEAA
E
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