| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1245 |
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| Symbol | |
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| ID | 8414124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1394110 |
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| End bp | 1395264 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022837 |
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| Product | alanine racemase |
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| Protein accession | YP_003180261 |
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| Protein GI | 257785044 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAT ATCCTCAGGA TAGATGGGCT TGGATAGAGA TTGATCTTTC TGCCGTCCGC
CACAATGTGA AGGCGTTTAA AGCCCAGCTT AACCGCGGAG TTAAGCTAAT GTGCGTGGTT
AAGGCTGACG CATACGGTCA CGGTGCTGCT CAGTGTGCTA AAGCCATGCA GTCTGTGGGT
GCCGATCAAT TTGCTGTTGC AACGGTTGAT GAGGGTGTTG AGCTGCGTTG CTCTGGCATT
GAAAGTCCTA TTCTGGTGCT TTCTGAGCCA CCCGTCACTT CTATTCCAGA CCTTGTTCGC
TTTGACATCA TGCCTTCCGT CTATACAGTT GATTTTGCGC TTGCCTACGG CGAGGCTTCT
GCTGCAGCTA ACAAAGTTGG TCGCTATCAT CTGGCCATTG ATACTGGCAT GACCCGTATT
GGTGTCAGGC GAGAAGATCT TCTTGAGGTG CGCGGTTCTA TTGATTTCCA CAGGGGTCTT
GAGTGTGCTG GTACGTTTAC GCATTTTGCT ACGGCCGATG TGCTTGACAA CTGGGATTTT
GACCTGCAGG TTAATCGTTT TGTTGAAGCA ATTACAGCAC TCAAAAATGC AGGCTATGAG
CTAGGCTTGG TTCACGCTGA CAACACTCCC GGTACCATCC TGCACAAAGA TATACAGTTT
GATATGGTCC GCGTAGGCAT TGGTCTGTAT GGGCTTCATC CAAGTAAACT CACCATTCCA
CGCATTGACC TGCAGCTCGT TATGAGCGTA CGCGGTCGTG TGACGCGTGT GGTCTATCCA
GCTGTTGGTG ATGGTGTTGG TTACGGTATG ACCTGGCGCG TTCCTCGTAA TAACATTCAG
GTAGCAACAG TGCCTATCGG TTACGCTGAC GGACTTGCAC GTAATCTTTC TAACCGTATG
GATGTTCTGG CGCGCGGAAG TCGAGTGCGC CAGGTAGGCA ACATTTGTAT GGATCAGTTC
ATGATTGCCG TTGATACAAC AGGTGCGCGT GCTAACAAGC CTGTGTACGA GATTTGTTAT
GGTGACGTGG TAACCCTTAT TGGTAAAGAT GGCGACCAAG AAATCACCGT AGATGAGATG
GCTGATCTGC GTGAAACTAT CAACTACGAG GTAGTTTGCA ACTTTGGTGC TCGCCTTGAT
AAGGTGTACA TCTAA
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| Protein sequence | MSAYPQDRWA WIEIDLSAVR HNVKAFKAQL NRGVKLMCVV KADAYGHGAA QCAKAMQSVG
ADQFAVATVD EGVELRCSGI ESPILVLSEP PVTSIPDLVR FDIMPSVYTV DFALAYGEAS
AAANKVGRYH LAIDTGMTRI GVRREDLLEV RGSIDFHRGL ECAGTFTHFA TADVLDNWDF
DLQVNRFVEA ITALKNAGYE LGLVHADNTP GTILHKDIQF DMVRVGIGLY GLHPSKLTIP
RIDLQLVMSV RGRVTRVVYP AVGDGVGYGM TWRVPRNNIQ VATVPIGYAD GLARNLSNRM
DVLARGSRVR QVGNICMDQF MIAVDTTGAR ANKPVYEICY GDVVTLIGKD GDQEITVDEM
ADLRETINYE VVCNFGARLD KVYI
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