| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1232 |
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| Symbol | |
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| ID | 8414111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1383977 |
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| End bp | 1385338 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022825 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003180249 |
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| Protein GI | 257785032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000615653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACT CAACGCAATT TGACAGCAAA ACTGAATCGC CCAGCACAAC CTCTGGCGAG
CAATCTAACT ACTTTTTTGC ACTCATTCTT TCCTTGATAT TTGGCATTTT TGGCGTTCCA
CAGTTGTATC TCAAGGGTTG GAAATCAGGG CTTACAAGAC TTGTTGTAAA TACGACGCTG
ATTGTTGGCA CAATCGTCCT AGCTCAAATA TTTGCCTTAC CAGCATTGCT TTCTTATCTT
CTACCAGCAA TTCTTTCGTA CCCGGTTATC GAGAGCGCTC TAAACCTCAT TTACGAAGAT
GCCAATGCTT CCAAAAAACT CATAAAAGGC AAGCTCAAGC TCCACAAGCG GTACGCCGGA
AAACAAAAAG CCGGAATTGC ATTAGCCTCA CTGAGTATAG CGCTCTACTT TAGTGCTGCA
CTGACGCAGC CGCTTCCAAC TACCGTCTCT ACCGCGGGCG TATCAGGTCA ACAAGCCACA
GTTCAAGCGA CCAACGCACC CTCGCAGACA GACTCCGACA CGTCATCCAC AACCTCGCTG
GCAAACACAA ACGTAACCAT CAAGTTTATC GACGTTGGCC AAGGAGAAGC AATTCTCATT
GCACTTCCCG AAAAAACCAT GCTTATCGAT GCCGGTCCTA CAGGTTCAGG TCCAAAAATT
TCTCAGGTGC TCCATGAACT TGGTCGAGAG AAGATTGATT ACCTGGTAGC TACCCATCCT
GACGAAGATC ACATTGGTGG CATGGCGGAC GTCATTTCCA GCACCCAAAT CGGAACCATT
TACGCACCAA ATAAGACAAA CAACACGGCA ACATACAGAA AGTTTCTAAC CGCTATTCAG
AACAATAACC TACAAATAAC CCTTGCTGAA GCAGGGACCA TCATCGACCA AACCGATGAC
TACAAGATAG AAATTCTTTG GCCAGCCAAA GACGCAAATT TTCCCGATAC CAATGACTAC
TCGATAATTA TCAAACTAAC CATTGGCAAC AAGACGTTTC TTTTCACGGG AGATGCACCT
ACAAGCGCAA TCCTTCAGAG CAATCCAGGC CACATCGACG TGCTCAAGCT CTCCCATCAC
GGCTCTAGAA CAGGTACAAA TGAGCAACTG GTCCGCAAGC TATCGCCCAC TTACGCCCTC
ATTTCTTACG CTTTGGATAA CTCCTACGGA CACCCCATGA AGTCAGTCTT AAACGCCCTC
CACAAACATT CCGTTGAGAT TTGGGGAACG GGAGCTAACG GAACTATTAC CATTACCTGC
GATGGTACAA CCATTGAAAT ATCTGGCGAG AAGAACGGCA CTGTTGTTGC TCCTACCTCA
CCAGAAAAAT CTGGCACGTC GTCGACATCG AGGACTAAGT AA
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| Protein sequence | MPNSTQFDSK TESPSTTSGE QSNYFFALIL SLIFGIFGVP QLYLKGWKSG LTRLVVNTTL
IVGTIVLAQI FALPALLSYL LPAILSYPVI ESALNLIYED ANASKKLIKG KLKLHKRYAG
KQKAGIALAS LSIALYFSAA LTQPLPTTVS TAGVSGQQAT VQATNAPSQT DSDTSSTTSL
ANTNVTIKFI DVGQGEAILI ALPEKTMLID AGPTGSGPKI SQVLHELGRE KIDYLVATHP
DEDHIGGMAD VISSTQIGTI YAPNKTNNTA TYRKFLTAIQ NNNLQITLAE AGTIIDQTDD
YKIEILWPAK DANFPDTNDY SIIIKLTIGN KTFLFTGDAP TSAILQSNPG HIDVLKLSHH
GSRTGTNEQL VRKLSPTYAL ISYALDNSYG HPMKSVLNAL HKHSVEIWGT GANGTITITC
DGTTIEISGE KNGTVVAPTS PEKSGTSSTS RTK
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