| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1231 |
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| Symbol | |
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| ID | 8414110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1383216 |
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| End bp | 1383938 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645022824 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_003180248 |
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| Protein GI | 257785031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00292782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.938548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTCTG TAGCTGGCGC TCCTGTTGTT TACCTCTTGG GAAACGTAGC CGACAACTCT
TCCGTCCAGG TACCTGAAAG CGTCAGCCTA GTAACAGTTG GCGTTAACCT GTGGGAACAA
AATTTCTCGC CTTGGTGCGC TCCACGCGTT TTTGCCAAGG GACCCAACTT TGGAGATGGC
GCACAGAAAA CACTTGATAC GCTGATTGAC CAAATAATTC CTTGGGCAGA ATCGGAGCTT
ACCGAGCCAC CGAAATATAG AGTGCTTGTA GGCTATTCAC TCGCGGGACT GTTTAGTCTC
TGGGCTGGTG TGTCGCAGTC CAGCACGTCA AAGCAGGCCG CATGCGGCTG CCAGCCCTGC
GCTCCCGCCT CGTTGCAGCT CAGCGCCACC GCCGCACCGC AGCCCGATGA CACCCCCATC
ATCGCAACCT TCCAGCGCAT CGGATCTGTA TCGGGATCAT TTTGGTTCCC AGGCCTTTTG
GACTACGTAG ACCATCAGCT CAGTGCAAAG GCAGTCGGCC TCACACACGC CTATCTTTCA
CTGGGAGACC GAGAAGCACG GACTCCCAAT CCACAAATAA TGCACGTACG AGAAAACGCA
GAACTTCTCG CCAACAAGTT AGTGAACGCG GGGATAACCT CGACGTTTGA GCTAAACCGT
GGAAATCACT TTCAAAATGT TGAGGGAAGA ATGCAAAAAG CTCTGGACTG GCTGCTCAAA
TAG
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| Protein sequence | MSSVAGAPVV YLLGNVADNS SVQVPESVSL VTVGVNLWEQ NFSPWCAPRV FAKGPNFGDG
AQKTLDTLID QIIPWAESEL TEPPKYRVLV GYSLAGLFSL WAGVSQSSTS KQAACGCQPC
APASLQLSAT AAPQPDDTPI IATFQRIGSV SGSFWFPGLL DYVDHQLSAK AVGLTHAYLS
LGDREARTPN PQIMHVRENA ELLANKLVNA GITSTFELNR GNHFQNVEGR MQKALDWLLK
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