| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1228 |
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| Symbol | |
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| ID | 8414107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1378152 |
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| End bp | 1379210 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645022821 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_003180245 |
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| Protein GI | 257785028 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.966969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGTT ATGCAATGCT CAAGATCGGC GAGTCCGGCT GGATTGAGAA GGAGACACCA
AAGTGTGGTC CTTTGGACGC AATCTGCAAG CCACTTGCGG TCGCAATTTG TACTTCTGAT
ATTCATACTC TGTGGGAGGG CGCAATCGGC GACCGTCATA ACATGATTCT TGGTCATGAG
TGCTCCGCAG AGGTTGTTGA GGTTGGCGAG TGCGTTAAGG ACTTCAAGCC TGGCGACCGC
GTCCTCGTTC CTGCAATTAC TCCAGACTGG AACTCTCTTG AGGCTCAGGC TGGTTACTCC
ATGCACTCCG GTGGCATGCT TGCTGGCTGG AAGTTCTCCA ACTTCAAGGA TGGCGTCTTC
TCTGAGTACT TCCATGTAAA CGATGCTGAT GGCAATCTCG CTCACATGCC AGAGGGTATG
GACCCAGCAG ACGCTTGTAT CCTTTCCGAC ATGGTTCCAA CTGGTTTCCA TGCAGTCGAG
CTTGCTGGCG TTGAGTTTGG CGACACCGTC CTAGTCATCG GCATTGGACC TGTAGGCTTG
ATGTCTGTTG CTGGTGCTGC ACTTCACGGT GCTTCTCGCA TTATTGCTGT TGGTACCCGT
CCAGTCTGCG TTGAGGCAGC TAAGGGCTAC GGCGCAACCG ACTTTATCTC TTACAAGGAC
GGTCCAATCT GGGAGCAGGT CATGGAGCTT ACCGGTGGTA AGGGCGTTGA CCGCGTCTGC
GTCGATGGTG GCGGCTGCGA GACCTTTGAG GATGCTGTTA AGGCTCTCAA GCCTGGCGGA
AAGATTGGTA ACGTCAACTA CCTTGGCTCT GGCGACTACG TCAACATTCC TCGCGTTGAG
TGGGGCGTTG GCATGGGCCA CAAGGACATT CGTGGCGGCC TCATGCCTGG CGGACGTCTG
CGCATGGAAA AGCTCTCCAG CCTTGTTACT TCTGGTCGTC TTGACCTTCA CCCAGAGGTT
ACTCACCTCT ATCACGGCTG GGATCACCTT GAGGAAGCTC TCTTCACCAT GCGTGATAAG
CCAGCTGACC TTATCAAGCC AGTTGTTGTT GTCGATTAG
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| Protein sequence | MKGYAMLKIG ESGWIEKETP KCGPLDAICK PLAVAICTSD IHTLWEGAIG DRHNMILGHE
CSAEVVEVGE CVKDFKPGDR VLVPAITPDW NSLEAQAGYS MHSGGMLAGW KFSNFKDGVF
SEYFHVNDAD GNLAHMPEGM DPADACILSD MVPTGFHAVE LAGVEFGDTV LVIGIGPVGL
MSVAGAALHG ASRIIAVGTR PVCVEAAKGY GATDFISYKD GPIWEQVMEL TGGKGVDRVC
VDGGGCETFE DAVKALKPGG KIGNVNYLGS GDYVNIPRVE WGVGMGHKDI RGGLMPGGRL
RMEKLSSLVT SGRLDLHPEV THLYHGWDHL EEALFTMRDK PADLIKPVVV VD
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