| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1225 |
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| Symbol | |
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| ID | 8414104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1375039 |
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| End bp | 1376418 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022819 |
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| Product | hypothetical protein |
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| Protein accession | YP_003180243 |
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| Protein GI | 257785026 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.438073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT CTGCATCTCT CCTCTCCACA GTGCTCTTTT CAAACATTGG GCAGTGGGAT
GTCAAGCAAT TCTTTCTGAA CATAATTCAG TCCTCGTATA CCGTGGAGGA GCTTGGCAAA
CACCTCGTCC ACCAAACCGA AAAAGTTCAA CTTTCAGATT ATCCAGAAGA CAAGTTTGTC
ATCTTGGGTG TGTCAAACAA AATTGGAATG TTTGATGCCA GCATTAAAAA AGGCAAGAAG
ATCAAGCAAA AGTACCATGT TGTCAAAGAT GGTTGGCTAG CCTACAACCC ATACCGAATT
AACGTTGGCT CTATCGGCAT CAAAACCCCA GAGCTTCAAG GCGGGTATAT CAGCCCTGCT
TATGTTGTCT TCAGTTGTAA AGACACTTTG CTTCCTGAAT ATCTCTGGCT GATGATGAAG
AGCGATTATT TCAATGCTCT CATCAACGAT TCGACTACAG GCTCGGTACG TCAAACATTA
CGCTTCGATA AGCTGGCAAG CATCAAAGCG CCGATACCAA CAGTAGATGA ACAAAAAGAA
ATACTCGCCC AATATCACGC CACCCTCGCC GAGGCGGAGA AAAACATATC CGACGGCAAT
AGCTTCAGCG ACGGCCTGCT CTTCGACATC CAGTCAAAGG TCTCCGACCT AGAAAAGGAC
GAGTCTGCTG CAGAAAAGCC TTCCTCGATC ATTCAGCCGG TTCCCTTTGC TGCAATGTCA
CGTTGGGAGG TCGCCTATAC GCTCAAGAAG GGAAAGCTGG AGCGGGTTTA CGGTAGCTTC
AAGTGTCCTT TCAAATCGAT TTCAGAACTT ACCAAGGAAT CACTCTTTGG TCTGTCTCTT
AAGGCGTCGC TCAAGCAGGA AAGCGGCATG ATACCCATAC TCCGTATGTC AAATATCGTC
AATGGCGAAA TCGACTGCAG CAGCCTTAAG TATCTGCCAT ACAAAAGCGC TGTTACTCCG
AGGGAGCCGG ACAAGTGGCT TCTTCGCAAA GGAGACTTTC TTATCAACAG AACAAACAGC
AAAGAGCTGG TTGGCAAGTC TGCGGTATTC AATCTCGACG GCGACTACAC CTATGCCTCG
TATATCATAC GCTACCGCTT CGACACATCG GTCGTCCTGC CGGAGTACGT GAATATCATG
TTCATGCTTC CTCTGGTGCG AATCCAAATA GACACCATGA GCAGGCAGAC CGCAGGGCAA
TGCAATATAA ACAGCGGCGA GATCGGCTCT ATTAGAATTC CCATCCCGTC AATTCCGGAG
CAACAAGCCA TCATCGATAA GTACTACTCT ACGAAAGACG GCGCTGACGC GTTCTACGCC
AAAGCGGAAG AGCTAAAACA AAAAACCGCT GAGGACTTCG AGAAGAGCAT ATTTGCATAA
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| Protein sequence | MNDSASLLST VLFSNIGQWD VKQFFLNIIQ SSYTVEELGK HLVHQTEKVQ LSDYPEDKFV
ILGVSNKIGM FDASIKKGKK IKQKYHVVKD GWLAYNPYRI NVGSIGIKTP ELQGGYISPA
YVVFSCKDTL LPEYLWLMMK SDYFNALIND STTGSVRQTL RFDKLASIKA PIPTVDEQKE
ILAQYHATLA EAEKNISDGN SFSDGLLFDI QSKVSDLEKD ESAAEKPSSI IQPVPFAAMS
RWEVAYTLKK GKLERVYGSF KCPFKSISEL TKESLFGLSL KASLKQESGM IPILRMSNIV
NGEIDCSSLK YLPYKSAVTP REPDKWLLRK GDFLINRTNS KELVGKSAVF NLDGDYTYAS
YIIRYRFDTS VVLPEYVNIM FMLPLVRIQI DTMSRQTAGQ CNINSGEIGS IRIPIPSIPE
QQAIIDKYYS TKDGADAFYA KAEELKQKTA EDFEKSIFA
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