Gene Apar_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1210 
Symbol 
ID8414088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1356826 
End bp1357656 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content48% 
IMG OID645022804 
Producthypothetical protein 
Protein accessionYP_003180229 
Protein GI257785012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA AGACCGCCTT TAAGAAGACC CTCTATCGCT TCAACCACGA GGCGAACATA 
CTTTTACGAT CGAATTGGGA CGAATCGCCA GCGACTTTTA AACGGTTTCT TGACCGTATT
GAAGCAGAGC CGGATGTAAA GGCGTATCTC GATGATTGCG TTGATAGCCA TACCCCTGAG
GGCTTCAATG CAGAAGAAGA CGTCCGGGAG GTAGCGGGGG GCCTTAGAAC TACCCTCATC
AATTTCAGCA CTATACCCGA GGAAGAGAGC GCAGAAGTGT ATCTCATCCT CAAGGAAATG
ATTGTCCAGA ACATTTCCGG TAGAAGCTAT TTTTACTACA CCTTTGCGAG TGGAAATAAA
TTCGCGGATA TGTACAAAGG CTTCTTGGAC AAAGTTGTAC GGCGCCTCAT CGCGAACATA
ACCGAACATC TGACCATGAT TGGATTCGAA ATAGGACTCG ATGGCGGAGA TTCAGTGACA
AACAATTTCG GGTCCGTGAA CAACCTGCAG ATGAACCAAG CGACTGACAG CTCAACCATC
AACGCAACTC AGAACATCGG CATTGACGAG CAAGCTCTGA ACAAATTGAT TGATGCGATT
CTTAGCGCGG CAGGGACGGA AATTGACGAT GCCGAAACAA TTGAAGATGT ACGCGATAAT
GCCGAGATTG TTCGCGCGCA GATAGAAAGC GGGAAACCTA AGCGAGGAGT ACTCAAGAGC
GCACTTGGCT TCTTGCGAGG AGTCAACGGC GGGGTACAGT TCGCTGCTGC TGTTGTTCAG
CTTATCCAGT TCGTAAATAA CTGCGGCTTT CAATTCCCGC TACCTGGCTA A
 
Protein sequence
MTDKTAFKKT LYRFNHEANI LLRSNWDESP ATFKRFLDRI EAEPDVKAYL DDCVDSHTPE 
GFNAEEDVRE VAGGLRTTLI NFSTIPEEES AEVYLILKEM IVQNISGRSY FYYTFASGNK
FADMYKGFLD KVVRRLIANI TEHLTMIGFE IGLDGGDSVT NNFGSVNNLQ MNQATDSSTI
NATQNIGIDE QALNKLIDAI LSAAGTEIDD AETIEDVRDN AEIVRAQIES GKPKRGVLKS
ALGFLRGVNG GVQFAAAVVQ LIQFVNNCGF QFPLPG