Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1210 |
Symbol | |
ID | 8414088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1356826 |
End bp | 1357656 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022804 |
Product | hypothetical protein |
Protein accession | YP_003180229 |
Protein GI | 257785012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA AGACCGCCTT TAAGAAGACC CTCTATCGCT TCAACCACGA GGCGAACATA CTTTTACGAT CGAATTGGGA CGAATCGCCA GCGACTTTTA AACGGTTTCT TGACCGTATT GAAGCAGAGC CGGATGTAAA GGCGTATCTC GATGATTGCG TTGATAGCCA TACCCCTGAG GGCTTCAATG CAGAAGAAGA CGTCCGGGAG GTAGCGGGGG GCCTTAGAAC TACCCTCATC AATTTCAGCA CTATACCCGA GGAAGAGAGC GCAGAAGTGT ATCTCATCCT CAAGGAAATG ATTGTCCAGA ACATTTCCGG TAGAAGCTAT TTTTACTACA CCTTTGCGAG TGGAAATAAA TTCGCGGATA TGTACAAAGG CTTCTTGGAC AAAGTTGTAC GGCGCCTCAT CGCGAACATA ACCGAACATC TGACCATGAT TGGATTCGAA ATAGGACTCG ATGGCGGAGA TTCAGTGACA AACAATTTCG GGTCCGTGAA CAACCTGCAG ATGAACCAAG CGACTGACAG CTCAACCATC AACGCAACTC AGAACATCGG CATTGACGAG CAAGCTCTGA ACAAATTGAT TGATGCGATT CTTAGCGCGG CAGGGACGGA AATTGACGAT GCCGAAACAA TTGAAGATGT ACGCGATAAT GCCGAGATTG TTCGCGCGCA GATAGAAAGC GGGAAACCTA AGCGAGGAGT ACTCAAGAGC GCACTTGGCT TCTTGCGAGG AGTCAACGGC GGGGTACAGT TCGCTGCTGC TGTTGTTCAG CTTATCCAGT TCGTAAATAA CTGCGGCTTT CAATTCCCGC TACCTGGCTA A
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Protein sequence | MTDKTAFKKT LYRFNHEANI LLRSNWDESP ATFKRFLDRI EAEPDVKAYL DDCVDSHTPE GFNAEEDVRE VAGGLRTTLI NFSTIPEEES AEVYLILKEM IVQNISGRSY FYYTFASGNK FADMYKGFLD KVVRRLIANI TEHLTMIGFE IGLDGGDSVT NNFGSVNNLQ MNQATDSSTI NATQNIGIDE QALNKLIDAI LSAAGTEIDD AETIEDVRDN AEIVRAQIES GKPKRGVLKS ALGFLRGVNG GVQFAAAVVQ LIQFVNNCGF QFPLPG
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