| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1203 |
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| Symbol | |
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| ID | 8414081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1350962 |
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| End bp | 1351492 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645022797 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_003180222 |
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| Protein GI | 257785005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACT ACGGCTTACT TGCAAAACAG ATTATCTCGC TTGCCGAGGT TGACGCTCAC
TGGCTGCCGG TGTTGTCTAA TGCTGCGGCT CTTTTGTGGG ACGCTCTGGA TGACATTAAC
TGGGCAGGCT TCTATCTGGT AGATCCTGCT ACGGTGGCGG GTGTGGAGCT AGGCTCGGGG
TCGGGTGCGG AGCCGGGGTT GGAGCCAGTC TCTCCCGATC TGCGCCTGGG GCCTTTCCAG
GGAAAGGTTG CCTGTGTGCG TATTCCTTTT GGAAGGGGAG TGTGCGGTAC GGCTGCGGCA
ACAAAGACAA GTCAGCTGGT AGAAGACGTG CATCAGTTCC CAGGACACAT TGCGTGCGAC
TCTGCATCAA ACTCTGAGGT AGTCGTTCCC ATCTTTGAGG GTGACCAGGT AGTTGGTGTG
TTAGACATTG ATAGTCCTAG CGCTGCACGA TTTACTCAAG AAGACCTAGC AGGTCTTGAG
CGGGTAGTAA AGGCGCTTGA GAGCTGTGTG GATTTCTCGG ACTTTTGCTA A
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| Protein sequence | MADYGLLAKQ IISLAEVDAH WLPVLSNAAA LLWDALDDIN WAGFYLVDPA TVAGVELGSG
SGAEPGLEPV SPDLRLGPFQ GKVACVRIPF GRGVCGTAAA TKTSQLVEDV HQFPGHIACD
SASNSEVVVP IFEGDQVVGV LDIDSPSAAR FTQEDLAGLE RVVKALESCV DFSDFC
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