| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1198 |
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| Symbol | |
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| ID | 8414076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1343908 |
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| End bp | 1345395 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022792 |
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| Product | phosphotransferase system EIIC |
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| Protein accession | YP_003180217 |
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| Protein GI | 257785000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.742148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACA CCAAGCTTTC AGAACAGATT CTTGCTGCCG TCGGTGGTAA AGAAAATGTT
CAGAGCAACA TGGTCTGCAT GACCAGGCTC CGCGTTAAGA CCGTAGATCC TTCAAAGGTT
GATTCTGAGG CCATCAAGGC TATTGATGGC GTCATGGGTC TGGTCGAGGA TGCAGAGTAC
CTTGAGGTTG TTCTTGGTCC TGGCGTTGTC AACAAGGTTA TTGTTGAGTT CTCCAAGCTT
ACCGGTGTTG CTGCTGGCGA CGCATCTGAG GATGATGTTG TTTCTGCAGC TAAGGACAAC
AAGGCAGCTC AGAAGGCTAA GTATGAGAAC AAGCCTGTTC AGCGTTTCCT AAAGAAGATT
GCTAACATCT TTGTTCCACT GCTTCCTGGC ATCATTTCTG CAGGTTTGAT TAACGGTATC
ATCAACGTTA TCAACTTCTC CACTGGTAAG GCTTATGCCA ACGAGTGGTG GTTTGCAGCT
ATCTGGACTA TGGGTTGGGC GCTCTTTGCT TATCTGCCAA TTCTCGCTGG CGAAAACGCT
GCCAAGGAGT TTGGTGGTTC TCGCGTTCTT GGTGCTATGG CTGGTGCACT TTCCATTGCT
AACGCTGGTA TGCCTCTTCT TGCTTCCAAG ACTGTTGACG GCGTTGCAAC TCGTTTGGTT
CACCTTCCAT TTAGCCTCCC AACTGTTGCT TTCAAGGAGG GCGCATTTAT CGTTGCTTCC
TCTGACCTGT TCAACGCAGC AGCAGGCGGC ATGATTGGTG CAATCATCTG CGCAATCTTC
TTTGCATTCC TGGAGAAGAA CCTGCACAAG GTTATGCCAA GCGTTCTTGA CACCTTCCTG
ACCCCACTTT GCACCGTCAT CATCGGTGTC ATTGGTTCTG TCCTGATTCT TCAGCCTGCA
GGTGCATGGC TCACTCAGGC AATCTTCTTT GTTCTTCAGT TCTTCTATGA CAAGCTTGGC
GTCTTTGGTG CTTACCTGCT TGGTTCTACC TTCTTGCCAC TGGTTTCTGT TGGTCTTCAC
CAGGCACTTA CACCAATCCA CGTTATGCTT AACAACCCAG AAGGCCCAAC TCAGGGTATC
AACTACCTGC TTCCTCTGCT GATGATGGCA GGCGGTGGCC AGGTTGGTGC TGGTCTTGCT
ATTCTCTTCA AGACTAAGAA CAAGCGCGTT AAGAAGTACC TCACCGAGTC CATCCCAGTT
GGTATGCTCG GCATCGGCGA GCCTCTTATG TACGCAGTTA CTCTGCCTCT TGGTAAGCCA
TTCATTACCG CATGCCTTGG CTCTGGTGTT GGCTCCGTAA TTGCTTACCT CTTCCACCTT
GGCACCGTTT CCCAGGGCGT CTCTGGCCTC TTTGGTCTGC TGATTGTTCA GCCTGGTAAC
CAGGTCTTCT ACCTGCTTGC AATGCTTCTT GCTTATGCTG CAGGCTTTGC ACTTACTTGG
TTCTTTGGCG TTGACGAGGA TCGTATCAAC GACGTCTTTG GCGAGTAA
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| Protein sequence | MDYTKLSEQI LAAVGGKENV QSNMVCMTRL RVKTVDPSKV DSEAIKAIDG VMGLVEDAEY
LEVVLGPGVV NKVIVEFSKL TGVAAGDASE DDVVSAAKDN KAAQKAKYEN KPVQRFLKKI
ANIFVPLLPG IISAGLINGI INVINFSTGK AYANEWWFAA IWTMGWALFA YLPILAGENA
AKEFGGSRVL GAMAGALSIA NAGMPLLASK TVDGVATRLV HLPFSLPTVA FKEGAFIVAS
SDLFNAAAGG MIGAIICAIF FAFLEKNLHK VMPSVLDTFL TPLCTVIIGV IGSVLILQPA
GAWLTQAIFF VLQFFYDKLG VFGAYLLGST FLPLVSVGLH QALTPIHVML NNPEGPTQGI
NYLLPLLMMA GGGQVGAGLA ILFKTKNKRV KKYLTESIPV GMLGIGEPLM YAVTLPLGKP
FITACLGSGV GSVIAYLFHL GTVSQGVSGL FGLLIVQPGN QVFYLLAMLL AYAAGFALTW
FFGVDEDRIN DVFGE
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