| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1194 |
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| Symbol | |
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| ID | 8414072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1338122 |
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| End bp | 1341037 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022788 |
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| Product | magnesium-translocating P-type ATPase |
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| Protein accession | YP_003180213 |
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| Protein GI | 257784996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01524] magnesium-translocating P-type ATPase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.30528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA TGAAGCGCAC AACCCAAACA AAAACAACTC AGACCACCTC AGGAGAGCTT
GGACAGTCCC TGACTTTTGC CGCAACTCAC TCGGTAAAAA GTGTCTGTAG AAAATTCCAT
ACCACTCCCG ACGGCCTTGC CATTGACATT GCGCAAGCAA AATACGACCT CGATGGCCCA
AATGTTATCA CCGGTGCCGC TGAAGAGCCC TTCATCATCC GCTTGCTCAA GAGCTTTGCA
AGTCCCTTCA CCTTCATTTT GATTGCTCTC GCAGGCATTT CTTACATCAC TAACGTGGTC
CTTGCCACAG ATGGCGAGAA GGACCCTTCA ACCGTCATTA TCATTACGTC AATGGTGTTT
ATTTCCGGCA TTATCGACTT TGTCCAGAGC TCCAAGGGAG CCTCGGCAGC GGCGGCGCTC
TCCAAAATGG TGACCTCCAC TACAAGGGTT ATCCGTCGTC CCATCGACTT TGATGACCTG
GCCACTGACC AGGATTCTAG CCAAAATCTC AACCAGAACT CAGACGAAAG TACAGATGAA
CTCAAGGACT TTGAAGATGA ATACGCTACA GATGAAACCG CGGGCGAATC CGAGGACGCC
GCCGACGAAG ACGAAGCTTC AGAGCCTAAA CTTGCTTCCG CGCTGGGAGA AGAAATACCC
TTTGAACAGG TAGTTATTGG TGACATCATC CGCCTTGCTT CGGGCGACAT GATTCCTGCA
GATTGTCGCG TTCTGGACGC CAAGGACCTC TTTGTCAACG AAACAGCGCT CACCGGAGAA
TCAGAGCCTG TCGAGAAAAC CGCTGGTGTA GTCCACGCTC GCCGTCGCGC AGATGGAACA
CGCTATCCTC TCTCGCTCTC GGAGTGCACA AACCTGCTGT TCGCCGGCAC TACCGTTCAG
TCAGGAAGTG CAACGGTGGT TGTTGTTGCA ACTGGCAACA AGACTTATGT GGGCACAATG
TCCGAGATGC TCCAGCAGCC TTCTGGCGAG ACCAGCTTTG ATGAGGGTCT CAAGTCCGTT
TCCAAGGTAC TTGTTTCCTT CATGTTGATC ATGTGCCCCA TCGTGTTCTT TGCAAACGGA
TTCCTTAAGG GCGACTGGTT TGATGCACTG CTCTTCAGCG TTTCCGTTGC CGTTGGTATT
ACTCCTCAGA TGCTGCCCGT TATTGTAACC ACTTGCCTTT CTCGCGGTGG AACACAAATG
GCCAAGCAGG ACGTTATTGT TAAGAATCCA GCCGCAATCC AGAACCTGGG CGCCATGGAC
ATCCTGTGTA CCGACAAAAC TGGCACCATC ACCGCAGACG AGGTTGTTCT CGAACGTCAC
CTCAACATTC TGGGTGAAGA GGACGCTCGC GTGCTCCGCC ATGCGTATCT GAACAGCTAC
TTCCAAACCG GCCTCAGAAA CCTTATTGAC AAGGCAATCA TCAAGACTTC AAACGATGAA
CTGCCCACCA ACTTGCTGAG CATTGAATAC GAGAAGATCG ACGAAGTCCC GTTTGACTTT
GAGCGTCGCC GCATGAGCGT TGTGGTAAGA AACACAAAAA CTAACAAGAC GCAGATGATC
ACTAAGGGCG CCGTTGAAGA AGTCCTCAAC GCATGCTCCT TTGTTGACCT TGACTCTGAG
ATTAAGCCAC TCACTCCCGC CCAGCGCAAG AGCGTTATGG ACCGCGTCTA CCAGCTCAAT
CAGGAGGGTA TGCGCGTGGT TGGCGTTGCT CAGAAGAGCG ACCCTCGCGG CGTCGGCGAG
TTTGGCGTAG ACGATGAGCG CGACATGGTG CTCATTGGCT ACCTGGCCTT CTTGGATCCG
CCAAAAGAGA GCGCTCGCGA GGCAATTGCC AAGCTTAACC AGAGAGGCGT GCAGGTCAAG
GTGCTCACCG GCGACAACGA GGGCGTTGCT GCCGCCGTCT GCAAAAAAGT GGGCATCCAC
GTTGACGAAC TCCTGCTTGG TAGCGACGTA GAGAACCTCA ACGATGAGCA GCTCAAAGAG
CGTGTTGAAA AGACCCAGCT CTTTGCAAAG CTTTCCCCCA TGCAAAAGGC CCGTGTTGTC
TCTGCGCTCA GATCCAACAA CCATGTTGTC GGCTTTATGG GCGACGGCAT TAACGATGCT
GCTGCTATGC GCTCTTCCGA TGTAGGAATT TCCGTAGATA CCGCTGTTGA CGTGGCAAAA
GAATCTGCTG ACATTATCTT ACTGCAAAAG GATCTGCTGG TACTTGAGCA CGGCGTTGAA
GAAGGTCGCA GAACCTACGG CAATACCATC AAGTACATCA AGGCAACCGC AAGCTCCAAC
TTTGGTAACG TACTGTCCGT TTTGGTGGCC AGTTTCTTCC TTCCGTTCTT GCCTATGAGC
GCCCTTCAGC TGCTCCTTTT AGGACTCGTA TACACCGTTA CCTGCATTGC CATTCCTTGG
GACAACGTGG ATGATTCATT CCTTTCAAGT CCGCGCTCTT GGGACGCCCA TTCAATTACA
AACTTTATGC TTTGGATTGG ACCTATCAGT TCAATTTTTG ATGTACTTAC CTTTGCCCTC
ATGTTCTTTA TGGTCTCTCC CACTCTTGCC GGAGGAACCT GGGCAGAACT TACCGCAGCT
GGAAACACCG CAGCTCAGAC GCTCTTTATC CTGTCTTTCC AAACAGGCTG GTTCATCGAA
TCTATGTGGA CCCAAACCTT TGTCCTCCAC GCACTTAGAA CCAATAAAAT CCCGTTTGTT
CAGAGCATGC CATCAGCTTC CTTACTTACT CTAACCACCG CGGGAATCGT TGTAGTCAGC
GCTCTTCCGT ATCTGCCGGT GTTCGCCCAG CCCTTGAGCC TTGTTGCTCT ACCTTTGTCG
TTCTTTGGAT GGCTAATTGC ACTCATGAGC GGGTATATGG TTCTTATCAC CATAATCAAG
AGCCTCTACG TTAAGCGATT TGGCTCTCTG CTCTAA
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| Protein sequence | MTIMKRTTQT KTTQTTSGEL GQSLTFAATH SVKSVCRKFH TTPDGLAIDI AQAKYDLDGP
NVITGAAEEP FIIRLLKSFA SPFTFILIAL AGISYITNVV LATDGEKDPS TVIIITSMVF
ISGIIDFVQS SKGASAAAAL SKMVTSTTRV IRRPIDFDDL ATDQDSSQNL NQNSDESTDE
LKDFEDEYAT DETAGESEDA ADEDEASEPK LASALGEEIP FEQVVIGDII RLASGDMIPA
DCRVLDAKDL FVNETALTGE SEPVEKTAGV VHARRRADGT RYPLSLSECT NLLFAGTTVQ
SGSATVVVVA TGNKTYVGTM SEMLQQPSGE TSFDEGLKSV SKVLVSFMLI MCPIVFFANG
FLKGDWFDAL LFSVSVAVGI TPQMLPVIVT TCLSRGGTQM AKQDVIVKNP AAIQNLGAMD
ILCTDKTGTI TADEVVLERH LNILGEEDAR VLRHAYLNSY FQTGLRNLID KAIIKTSNDE
LPTNLLSIEY EKIDEVPFDF ERRRMSVVVR NTKTNKTQMI TKGAVEEVLN ACSFVDLDSE
IKPLTPAQRK SVMDRVYQLN QEGMRVVGVA QKSDPRGVGE FGVDDERDMV LIGYLAFLDP
PKESAREAIA KLNQRGVQVK VLTGDNEGVA AAVCKKVGIH VDELLLGSDV ENLNDEQLKE
RVEKTQLFAK LSPMQKARVV SALRSNNHVV GFMGDGINDA AAMRSSDVGI SVDTAVDVAK
ESADIILLQK DLLVLEHGVE EGRRTYGNTI KYIKATASSN FGNVLSVLVA SFFLPFLPMS
ALQLLLLGLV YTVTCIAIPW DNVDDSFLSS PRSWDAHSIT NFMLWIGPIS SIFDVLTFAL
MFFMVSPTLA GGTWAELTAA GNTAAQTLFI LSFQTGWFIE SMWTQTFVLH ALRTNKIPFV
QSMPSASLLT LTTAGIVVVS ALPYLPVFAQ PLSLVALPLS FFGWLIALMS GYMVLITIIK
SLYVKRFGSL L
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