| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1186 |
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| Symbol | |
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| ID | 8414064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1327595 |
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| End bp | 1330225 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645022780 |
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| Product | ATPase AAA-2 domain protein |
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| Protein accession | YP_003180205 |
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| Protein GI | 257784988 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0316758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATA AATTCACTGA CAGAGCGCGT AAAGTCATGA GCTTGGCTCA GGACGAAGCT
CGCGGTCTAG GCCAGATGTA TGTTGGTACC GAGCACCTGC TACTTGCTCT CATCAAAGAG
GGGGAGGGCA TTGCTGCTCA GGCTTTGGCT AAGCTGGAGG TCTCATATGA TGAGGCCCTA
GCAACTGTAA AAGAGCTTAC TACTGGCGCA GGAGACCCTA TTCCTGGCGG CCACATTCCG
TTTACTCCTC GCGCAAAACG CGTGCTTGAG GACGCATACA GAGAAACCAT GACCCATGGT
CAAAGTTATA TTGCAACGGA GCACTTGCTT TTGGGCATTG TGTCCGAGGG TAACGGTCGC
GCTATGGATG CCCTGCGTAC CATGGGTGTC TCGGGTGACG CGGTAAGAAA CGCCGTTGAT
GAGCTGGTTG CTCAGACTCC AGAAGACGCG CCTGCTGGTC CTCACATGGC AGAACCTCGC
ATTGAGGGTG GCATCTTTGG CATACCTGTT GGTGCTGGTC AGATGCATCC TAACGCAAAC
GATGACGCTT CCATGCTGGA ACAGTTTGGT CGCAACCTTA CTAAGCTTGC CGCAGATAAA
AAGCTTGATC CTGTCATTGG TCGTGACCGC GAGATTGAGC GTGTCATGCA GGTTCTTGCA
CGCCGTCAGA AGAACAACCC GCTTATTCTG GGAGATCCTG GCGTTGGCAA GACTGCCATT
GTTGAGGGCC TGGCTCAGCT CATTGCTTCT GGCAACGTCC CTGATATTCT GCGCGGAAAG
CAGGTTTGGA CGCTTGATTT AGCAAGTCTG GTAGCTGGCT CTAAGTATCG CGGTGAGTTC
GAAGACCGTA TGAAGAAGGT TGTTGCTGAG CTGGAGAAAT CCAAGAACGA CATCCTCTTT
ATTGACGAGA TTCACACCGT CATTGGCGCA GGCTCTGCAG AGGGCTCTAT AGATGCCGCT
TCCATTCTTA AGCCACCACT GTCTCGTGGA GAAATTCAGG TCATCGGTGC AACTACGGCA
GAAGAGTACC GTAAACATGT CGAGAAGGAC GCTGCATTTG AAAGGCGTTT CCAGCCTGTC
AATATTGGCG AGCCAAACAA TGACGACACC ATTTCTATCA TCCACGGTCT TCAGGACCGC
TACGAGAAGC ACCACCATGT TCACTACACC GAGGCTGCTA TCAAGGCTGC CGTTGCGCTT
TCTAGCCGCT ACATCCAGGA TCGTTTCTTG CCAGACAAGG CTATTGATGT CCTTGATGAG
GCCGGCGCTC GCGCACGCAT CCACAAGATG AGCCTTCCAC CAGAGATTGC CCAGGTAGAC
GCAGACCTTC TCCGCGTTCG TACTGAGAAG TCCGAGGCAG CTAGTGCTCA GGAGTTTGAG
CAGGCAGCTC GTCTGCGTGA CCAGGAGAAA TCCCTGGTAG CAGAGAGGGA CCGCTTAGAG
ACTGAATGGC GTGAGCAGCT AGACAAGAAC ATCGTTACCG TTGACGAGGA CGACATTGCA
AAGGTTGTCT CTGGCATTAC TGGTGTTCCT GTTTCTAACC TCACCGAGAC TGAGGCTTCA
AGGCTGCTTC GCACAGAAGA TATCCTTCAC AAGCGCGTTG TTGGTCAGGA CGAGGCAGTT
GTTAAGGTTG CAAAGGCAAT CCGTAGAAGC CGCAGTCCTC TCAAAGACCC TAAGCGACCT
GGTGGCTCCT TCATCTTCCT AGGTCCTTCC GGTGTAGGTA AGACCGAGCT TGCAAAGGCT
CTAGCAGAGT TTTTGTTTGG CTCCGAAGAT GCCCTGCTTT CTTACGATAT GTCCGAATAC
ATGGAGCGTC ACACCGTAGC TAAGCTGGTT GGCGCACCTC CAGGATATGT GGGCTATGAT
GAGGGTGGCG AGCTTACCAA GGCGGTTCGT AGGCGTCCAT ACTCTGTCTT GCTCTTCGAC
GAGATTGAGA AGGCACATCC AGACGTCTTC AACATTTTGC TTCAGATTCT GGACGAGGGT
CGCTTGACTG ACGGTCAAGG TCGCCACGTG GACTTCTCCA ATACTGTTGT CATTATGACA
TCTAACATTG GTGCTCGCGA GATTGCCCGC ACCAACACTA TGGGTTTCTC GTCAGAGGGT
TCTAAGGGTC TGTCTGACAA AGAGATTACC AGCCGCGTTA TGTCTGAGCT CAAGCGTGGA
TTCCGCCCAG AGTTTTTGAA CCGCGTGGAC GAGATTGTTG TCTTCAAGTC GCTCTCTGCC
GAGCAGCTTC GTGGCATTGT TGACCTCATG GTTCTTGAGC TGCGCGACCG CCTGATTGCC
AACGGCATGT CCATTGAGCT TACCGAGGCT GCAAAGGATC TGATTGCCAA AGATGGTACC
GATCCTGTCT ATGGTGCTCG TCCGCTGCGT CGTACCATTC AGTCGATGAT TGAAGATCCA
CTGTCTGAGG AGCTTCTTTC TGGACAGTGG GTTGCAGGTG ACATTGTTGC TGTTGATGTT
GATGCTGAGG GCAAGAAGCT TGTGTTTACC AAGACTACAG GCGTCATCCC TGAGCCTCGT
AAAAAAGAGA CAATGGCGCA GCTTGATCAG ATGGATGTCA GCATGGGGCC ATCCTCGCTG
CCACAGGGTA GTGCGGGCAG CTCGTCTGAT TTGATGTCTT CTGCTGAGTA A
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| Protein sequence | MFDKFTDRAR KVMSLAQDEA RGLGQMYVGT EHLLLALIKE GEGIAAQALA KLEVSYDEAL
ATVKELTTGA GDPIPGGHIP FTPRAKRVLE DAYRETMTHG QSYIATEHLL LGIVSEGNGR
AMDALRTMGV SGDAVRNAVD ELVAQTPEDA PAGPHMAEPR IEGGIFGIPV GAGQMHPNAN
DDASMLEQFG RNLTKLAADK KLDPVIGRDR EIERVMQVLA RRQKNNPLIL GDPGVGKTAI
VEGLAQLIAS GNVPDILRGK QVWTLDLASL VAGSKYRGEF EDRMKKVVAE LEKSKNDILF
IDEIHTVIGA GSAEGSIDAA SILKPPLSRG EIQVIGATTA EEYRKHVEKD AAFERRFQPV
NIGEPNNDDT ISIIHGLQDR YEKHHHVHYT EAAIKAAVAL SSRYIQDRFL PDKAIDVLDE
AGARARIHKM SLPPEIAQVD ADLLRVRTEK SEAASAQEFE QAARLRDQEK SLVAERDRLE
TEWREQLDKN IVTVDEDDIA KVVSGITGVP VSNLTETEAS RLLRTEDILH KRVVGQDEAV
VKVAKAIRRS RSPLKDPKRP GGSFIFLGPS GVGKTELAKA LAEFLFGSED ALLSYDMSEY
MERHTVAKLV GAPPGYVGYD EGGELTKAVR RRPYSVLLFD EIEKAHPDVF NILLQILDEG
RLTDGQGRHV DFSNTVVIMT SNIGAREIAR TNTMGFSSEG SKGLSDKEIT SRVMSELKRG
FRPEFLNRVD EIVVFKSLSA EQLRGIVDLM VLELRDRLIA NGMSIELTEA AKDLIAKDGT
DPVYGARPLR RTIQSMIEDP LSEELLSGQW VAGDIVAVDV DAEGKKLVFT KTTGVIPEPR
KKETMAQLDQ MDVSMGPSSL PQGSAGSSSD LMSSAE
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