| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1182 |
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| Symbol | |
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| ID | 8414060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1323346 |
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| End bp | 1324986 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 645022776 |
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| Product | ABC transporter related |
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| Protein accession | YP_003180201 |
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| Protein GI | 257784984 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.221898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000151899 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAGT TTTTTAACAT TATTCACTAC TGTATATCTA CCATTCTGGA TAAAGGCAGT
CTTGCAGTCT TTCTCTTTCT GTCATTTTTT GTTACAGCGC TTACTGTAAT TCAACCGCTT
CTTGTTGGAT TTGTGATTAA TCTTTTTATT GCAGGAACAA CTTGGAACGA AATAATTTTC
TATTGTGCCG TAATTGCTGC ACTAGGAATC CTTATTGCCA GCTGCTCCTA TCTTGCTAAA
ACGCGCTATT GTCAATTACA AATTGACTCT GCCTTTACTA TTGAGCGACA GCTCATCGAT
AAGATCCAAC ACGCCGATCC ATCGTTTTTC TCGTCATATG ATTCCGGACA TTATCGTCAG
ACAGTAAATA ATGACGCTAA TGATGTTTCC ATTTTTATAC TTACACAATG TGTGAGCTTT
GCAACAACTA TTATCTCCGT CTTAGGAACT CTTGCGATAA TTTTATATTT GAACCCATTA
ACTGCTCTTG TAACGGCTGC TCTGTTATTG ATTAGCTACA TTATCTATAA GCAGATTCAA
GCATCAGCCT ATAAAAGATA CAGAGAATCT AAAGAGCTGA GATCTCAATA TGGATCAGTA
GAACTCTCAC AATTTACTGA TGTTGATTTC ATCAGACGTC ATTCTCTTTT TGAGCGTTTC
TTTAATCAGC ACTATGTCCT TAATCAAAAA CTTCGTAATG CTATTAATCA ACAATACAAA
CTGGAGTTTG GTGTACAGGA GTTAAACAAT GCTGTAATTG CCGTATTCCA AGCCATTGTA
TTTATTACTT GTGCGTATCA AATCTTTCTT GGAGCGCTGC AACCTGGTTA TATTGCAACC
ATTTCAAGCT ATTTTGTAAC ACTCTTAGGT TCCATCACTC TTCTCATGGA ATTTGGTATG
GCTTATCAAA GCATTACGGT AAGCATCAAT CGAATTGAGC AGATTCTAGA TTTACCTCAA
GAACCCGTTG GAAACATCAT TCCATCAGAC AACGTCAATC AAATTACCTG CACAAATGTA
TCTTTTTCTT ATCCACATAC AAATAAAGTA CTGATGAACA ACTTGTCTTG TGATTTTGTA
AAAGGAAATA TATACGCCAT TACAGGTGGA AACGGTACAG GCAAATCTAC TTTTCTGAAA
CTCATTAACG GAGAGTGGTC TTCTCACCTA TCAGGTGACA TTGCCATTAA TGAGGACTTA
CTAGCTCAAA TAAATCAATA TGAACTTCGA AAAAACACTC TTGGATTTAC TGAACAAGAG
CCAAGCATTG TTGACGATAC GGTAAGAAAT AATTTGACCT TGCTCTGCAA AAATCAGCCG
AAAGATGAAG AGATAATCAA CTATATCAAG CTGTTCAATT TGGAAAAATT GCTGCTTGGT
GATGATCAAA ATCTTGACGT TCGTCTCAAT GAACGAAGCT CTGCAATCTC TGGTGGAGAA
AAACAAAAGA TTGCAATTAT CCGCATGATG CTTATGAATC CAAGTGTAAT GTTGCTTGAC
GAACCAACTT CTGCATTAGA TCAAAAAAGT GTTGAGGTTC TTCTTAATCT TCTAAAGAAG
GTCAAGAAAG ACCACATAAT ACTTCTCATA TCTCATGATC CTAAAGTGGT GGAAGCAGCC
GACCATATCG TAGAGCTGTA A
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| Protein sequence | MSKFFNIIHY CISTILDKGS LAVFLFLSFF VTALTVIQPL LVGFVINLFI AGTTWNEIIF
YCAVIAALGI LIASCSYLAK TRYCQLQIDS AFTIERQLID KIQHADPSFF SSYDSGHYRQ
TVNNDANDVS IFILTQCVSF ATTIISVLGT LAIILYLNPL TALVTAALLL ISYIIYKQIQ
ASAYKRYRES KELRSQYGSV ELSQFTDVDF IRRHSLFERF FNQHYVLNQK LRNAINQQYK
LEFGVQELNN AVIAVFQAIV FITCAYQIFL GALQPGYIAT ISSYFVTLLG SITLLMEFGM
AYQSITVSIN RIEQILDLPQ EPVGNIIPSD NVNQITCTNV SFSYPHTNKV LMNNLSCDFV
KGNIYAITGG NGTGKSTFLK LINGEWSSHL SGDIAINEDL LAQINQYELR KNTLGFTEQE
PSIVDDTVRN NLTLLCKNQP KDEEIINYIK LFNLEKLLLG DDQNLDVRLN ERSSAISGGE
KQKIAIIRMM LMNPSVMLLD EPTSALDQKS VEVLLNLLKK VKKDHIILLI SHDPKVVEAA
DHIVEL
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