Gene Apar_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1172 
Symbol 
ID8414045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1314013 
End bp1314534 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content50% 
IMG OID645022761 
Productribosomal protein L10 
Protein accessionYP_003180191 
Protein GI257784974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000357466 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000289216 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAGCTC AGTCTAAACT TGACTTGCTC GAGAAAGTTT CCACTTCTCT CGACAACTCC 
AAAGGCCTGT TTGTTATTGA CTATTGTGGT CTCTCCGTAA AGGAGACTCA AGAGCTTCGC
CGCGCACTTA CCGCAGCAGG CGCCCACATG AAGGTCTATA AGAACAACAT CGTCAAGATT
GCTCTTAAGA ACGCTGGTAT GCCAGAGATT GACGAGATGC TCGCCGGTAC CTGTGCATAC
GTTTTCTATG AGAACGATCC TGTCGAGGCC GCTAAGGTCA TCAAGGATCA GGCCAAGAAG
CTCAAGAAAC TTGAGTTCAT TGGTGGTATC GCTGATGGTC AGGCACTTAA TGCTAACGAG
GCAGAGGCTT ACGCAGATCT TCCTTCTCGC GAGGAGCTCA TAGCAAAGCT TGTCTTCGTT
GTTGCAAGCC CACTTACCGG TATTGCACAG GTTTGCGCTG GTCCAGCTCG TGGACTCGCA
ACCACTCTTT CTGCAATCGC AGATCAGAAG AACGCTGCAT AA
 
Protein sequence
MPAQSKLDLL EKVSTSLDNS KGLFVIDYCG LSVKETQELR RALTAAGAHM KVYKNNIVKI 
ALKNAGMPEI DEMLAGTCAY VFYENDPVEA AKVIKDQAKK LKKLEFIGGI ADGQALNANE
AEAYADLPSR EELIAKLVFV VASPLTGIAQ VCAGPARGLA TTLSAIADQK NAA