| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1164 |
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| Symbol | |
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| ID | 8414037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1300306 |
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| End bp | 1302402 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022753 |
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| Product | translation elongation factor G |
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| Protein accession | YP_003180183 |
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| Protein GI | 257784966 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000382661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000123904 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGA CTAAGTACAA TCTTAAAGAC CTCCGTAACA TCGGCATCAT GGCTCACATC
GATGCTGGTA AGACCACCAC TACGGAGCGT ATTCTTTACT ACACCGGTAA GACCCACAAG
ATTGGTGAGG TCCACGACGG TGCAGCAACT ATGGACTGGA TGGTTCAGGA GCAAGAGCGC
GGCGTAACCA TTACTTCCGC AGCTACTACT TGCTTCTGGA AAGACCATGT CATTCAGATT
ATCGATACCC CAGGTCACGT TGACTTTACC GCTGAGGTTG AGCGTTCTCT TCGTGTTCTG
GACGGCGCAG TTGCAGTCTT CGACGCAGTT GCAGGCGTTC AGCCACAGTC CGAGACCGTT
TGGCGTCAGG CAACCAAGTA CGGCGTACCT CGTATTGCAT TCATCAACAA GTTTGACCGA
GTAGGCGCAG ACTTCTTCCG TGCAATCCAG ACCATGCGTG ACCGCCTTGG CGCAAACGCA
ATTGCAGCTC AGGTCCCAAT GGGCGCTGAG TCCAACTTCT GGGGTCTTAT CGACCTTGTC
ACCAACACTG CATGGGACTT TAAAGAGGAT GCTAAGGGCA TGATTTACCC TGAGCCACTC
GACGAGATTC CTGCAGAGTT TGTTGACGTT GCAGCTGAGA AGCGTGAGGA GCTTCTTGAG
GCAGCATCTG ACTTCTCCGA GGAGCTCATG ATGGCTGTTC TCGAGGGTGA AGAGATTGAC
GTTGATATCC TTAAGGGTGC TCTTCGTGCC GGTGTTCTTG CTGGCAAGAT TAACCCTGTC
TTTGTTGGTT CTGCTTACAA GAACAAGGGT ATCCAGGAGC TTCTTGACGC AGTTATCGAC
TTCCTTCCAA GCCCTCTGGA TGTTCCAGAG ATTGATGGCG TCACTCCTAA GGGAGACGAG
GCTGTCCGTC ATGCAGACGT TAAGGAGCCA TTCTCCGCTC TTGCATTCAA GATTATGACT
GACCCTTATG TTGGTAAGCT TACCTACATT CGTGTTTACT CTGGTCAGGC AGAGGCAGGT
TCATACGTCT ACAACTCCGT TAAGGACAAC CGTGAGCGCT TTGGCCGCAT CCTTGAGATG
AACGCAAACG ATCGTGTTGA CCGTGAAGAG TGCTCCGCGG GTGACATTGT TGCATGCGTT
GGTCTGAAGA ACACCACTAC TGGTGACACT CTTTGTGACG AGAAGAACCC AATCATCCTT
GAGTCCATCA GCTTCGCTGA TCCTGTTATC GACGTTGCTG TTGAGCCTAA GACCAAGGCT
GAGCAGGAGA AGATGTCCAT CGGCCTTGCT AAGCTGGCTG AAGAGGATCC AACCTTCCAG
GTTCACACTG ATCACGAGAC TGGTCAGACC ATCATTGCTG GTATGGGCGA GCTTCACCTT
GAGATTATTG TTGACCGTCT CCGTCGTGAG TTTAAGGTTG ACTGCAACGT TGGTAAGCCA
CAGGTTGCTT ACCGTGAGAC TGCTGGTAAG GCAGTAAGCC ACGCTGAAGG CAAGTTTGTC
CGTCAGTCCG GTGGTAAGGG TCAGTATGGC CACGCAGTTA TCGACCTTGA GCCACAGGAA
GAGGGCAAGG GTTACGAGTT TGTCAACGCT ATCGTTGGTG GTGTCATTCC TAAGGAGTAC
ATCCCATCTA TCGATAAGGG CATTCGCGAG GCTCTTGAGA ACGGTGTCAT TGCTGGTTAC
CCAGTAGTCG ACATTAAGGT TACCCTTGTT GACGGTTCTT ACCATGAGGT CGACTCTTCT
GAGGCAGCAT TCAAGATTGC TGGTTCTATG GCAGTTAAGG ATGCTCTTAA GAAGTCCAAC
CCTGTCCTTC TCGAGCCAGT TGAGTCTGTT GAGGTTGAGA CACCTGAGCA GTACATGGGC
GACGTTATGG GCAACCTTTC TTCCCGTCGT GGCAAGATTG AGGGCATGGA CGATCGTCAG
GACGCCAAGG TCATCCGCGC TAAGGTGCCT CTTGGTGAGA TGTTCGGTTA TGCAACCGAC
CTTCGTTCCC AGACCCAGGG CCGTGCGAGC TACACTATGC AGTTCGATTC TTACGAGCCC
GTTCCTAACG CTGTACGCGA AGAGATTGTC GCCAAAAACG GCGGCTCTGC ATCCTAA
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| Protein sequence | MAKTKYNLKD LRNIGIMAHI DAGKTTTTER ILYYTGKTHK IGEVHDGAAT MDWMVQEQER
GVTITSAATT CFWKDHVIQI IDTPGHVDFT AEVERSLRVL DGAVAVFDAV AGVQPQSETV
WRQATKYGVP RIAFINKFDR VGADFFRAIQ TMRDRLGANA IAAQVPMGAE SNFWGLIDLV
TNTAWDFKED AKGMIYPEPL DEIPAEFVDV AAEKREELLE AASDFSEELM MAVLEGEEID
VDILKGALRA GVLAGKINPV FVGSAYKNKG IQELLDAVID FLPSPLDVPE IDGVTPKGDE
AVRHADVKEP FSALAFKIMT DPYVGKLTYI RVYSGQAEAG SYVYNSVKDN RERFGRILEM
NANDRVDREE CSAGDIVACV GLKNTTTGDT LCDEKNPIIL ESISFADPVI DVAVEPKTKA
EQEKMSIGLA KLAEEDPTFQ VHTDHETGQT IIAGMGELHL EIIVDRLRRE FKVDCNVGKP
QVAYRETAGK AVSHAEGKFV RQSGGKGQYG HAVIDLEPQE EGKGYEFVNA IVGGVIPKEY
IPSIDKGIRE ALENGVIAGY PVVDIKVTLV DGSYHEVDSS EAAFKIAGSM AVKDALKKSN
PVLLEPVESV EVETPEQYMG DVMGNLSSRR GKIEGMDDRQ DAKVIRAKVP LGEMFGYATD
LRSQTQGRAS YTMQFDSYEP VPNAVREEIV AKNGGSAS
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