Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1160 |
Symbol | |
ID | 8414033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1297672 |
End bp | 1298298 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645022749 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_003180179 |
Protein GI | 257784962 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000738717 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000590673 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAGT ATGAGATTAA GAACGTAGAG GGAAAGAAGG TCGGTACTAC CGAGCTTTCC TCTGACGTCT ATGGCATTGA GCCAAACATC CCTGTTGTGC ATCAGGTTGT AGTCTGCCAG GACGCATCCG CACGTCAGGG TACCCACTCT ACAAAGAACC GTCACGAGGT ATCCGGCGGT GGCGTTAAGC CTTACCGTCA GAAGGGTACT GGTCGTGCTC GCCAGGGTTC TATTCGTGCT GGTCAGTGGA CTGGTGGTGG CGTCATTTTT GGACCTACCC CTCGTTCCCA CGCACGTCGT ATTAACAATA AGATGGTCAA GCTTGCTATG AGGTCCGTCC TCTCTGGCAA GGTTGCAGAC TCCGAGCTTG TCCTCGTTGA CTCTCTTGAG TTTGCTCAGC CTTCCACCAA GCAGGCAAAG GCTGCACTTC AGAACCTCGG TATTGAGGGT AAGCGCGTTA CCGTTATCGT TCCAGATGAT GACGTCAACA CTTACCTTTC TTTCCGCAAC CTTCCTAAGG TTTCGATTTT CGGCGTTTCT GAGGTTACTA CTCGTTTCCT GATTGACAAC GGCGCACTTG TTATGTCCGC TGATGTTGCT AAGCAGCTTG GGGAGGTGCT CGCATAA
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Protein sequence | MSKYEIKNVE GKKVGTTELS SDVYGIEPNI PVVHQVVVCQ DASARQGTHS TKNRHEVSGG GVKPYRQKGT GRARQGSIRA GQWTGGGVIF GPTPRSHARR INNKMVKLAM RSVLSGKVAD SELVLVDSLE FAQPSTKQAK AALQNLGIEG KRVTVIVPDD DVNTYLSFRN LPKVSIFGVS EVTTRFLIDN GALVMSADVA KQLGEVLA
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