| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1158 |
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| Symbol | |
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| ID | 8414031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1296398 |
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| End bp | 1297234 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645022747 |
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| Product | ribosomal protein L2 |
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| Protein accession | YP_003180177 |
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| Protein GI | 257784960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000162145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000663071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGTTA GGCATTTAAA GCCAACAAGC GCAGGCAGGC GCTTCCAGAC AATCTCAGAC
TTTGTTGAGA TTACAACTGA TAAGCCCGAG AAGTCCCTTC TCGAGCCCCT GCCAAAGAAG
GCTGGCCGCA ACAACAATGG TCGCATCACT ACCCGTCACC AGGGTGGTGG CCACAAGCGC
CAGTACCGTC GTATCGACTT CAAGCGTCGC AAGGATGACA TCCCAGCTAA AGTCGCTACC
GTTGAGTACG ATCCTAACCG TTCCGCTCGT ATTGCTCTTC TGCACTATGC AGACGGTGCA
AAGGCATACA TCCTTTGCCC AGAGGGCTTG AGCGTCGGTG ACACTGTTCT GTCTGGTACC
AAGGACGTCG ATATCAAGCC TGGTAATTGC ACCACTCTTG AGCAGATTCC AGTAGGTACT
CTTGTTCACG CAGTTGAGTT CCAGCCTGGT AAGGGTGCTG CAATGGCACG TGCTGCTGGT
ACTTCCGTCC AGCTCATGGG TAAGGACAAC GGCTATGCAG TTCTGCGTAT GCCTTCCTCC
GAGCTTCGTC GTGTTCTTCT GACCTGCCGT GCAACCATCG GTGAGGTTGG CAACGCTGAG
CACTCCAACA TTGTTGTTGG TAAGGCTGGT CGTTCTCGCT GGGCAGGCGT TCGTCCTACC
GTCCGTGGTA CTGTCATGAA CCCTGTTGAC CACCCACACG GTGGTGGTGA AGGTAAGAAC
CACACTTCTG GTCGTCCTTC CGTCACCCCA TGGGGTAAGC CAACCAAGGG TTATAAGACC
CGCGACCCGA AGAAGGCTTC TAACCGCCTG ATTATTCGCC GTCGTAAGTC CAAGTAA
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| Protein sequence | MAVRHLKPTS AGRRFQTISD FVEITTDKPE KSLLEPLPKK AGRNNNGRIT TRHQGGGHKR
QYRRIDFKRR KDDIPAKVAT VEYDPNRSAR IALLHYADGA KAYILCPEGL SVGDTVLSGT
KDVDIKPGNC TTLEQIPVGT LVHAVEFQPG KGAAMARAAG TSVQLMGKDN GYAVLRMPSS
ELRRVLLTCR ATIGEVGNAE HSNIVVGKAG RSRWAGVRPT VRGTVMNPVD HPHGGGEGKN
HTSGRPSVTP WGKPTKGYKT RDPKKASNRL IIRRRKSK
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