Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1145 |
Symbol | |
ID | 8414018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1290630 |
End bp | 1290998 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645022734 |
Product | ribosomal protein L18 |
Protein accession | YP_003180164 |
Protein GI | 257784947 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000549459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0107289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC AGCAGGCGAA AAAGGCGGGT CTTGAACGCC GCAAGCGCCG CGTACGTGCC AAGGTCTTTG GTACATCTGA GCGTCCGCGT CTTGCAGTTC ACCGTTCAAA CGCAAACATT TATGCACAGC TTATTGACGA CGCTTCTGGA AGAACTCTCT GCTCTGCCTC TACGCTTGAC CCAGAGTTCC GTTCTACTGG CAAGGTTGGC TCCAACAAGG AGGCAGCTGA GTTCGTAGGT GAGCTTATCG GTAAGCGCGC TGCCGAGAAG AACGTCACTG AGGTCACTTT TGACCGTGGT GGTCGTCTTT ATCACGGCCG CGTTAAGGCT TTGGCAGATG GCGCCCGCAA CGCGGGCCTG AAGTTCTAG
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Protein sequence | MKKQQAKKAG LERRKRRVRA KVFGTSERPR LAVHRSNANI YAQLIDDASG RTLCSASTLD PEFRSTGKVG SNKEAAEFVG ELIGKRAAEK NVTEVTFDRG GRLYHGRVKA LADGARNAGL KF
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