| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1138 |
|---|
| Symbol | |
|---|
| ID | 8414011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1286362 |
|---|
| End bp | 1286580 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645022727 |
|---|
| Product | translation initiation factor IF-1 |
|---|
| Protein accession | YP_003180157 |
|---|
| Protein GI | 257784940 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
|---|
| TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000117845 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0449626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAC AAGACGCGAT TGAGCTTGAA GGCAAGGTAT TAGAACCCCT GCCAAACGCT
ATGTTTAACG TTGAGTTAGA AAACGGCAAG ACCATCCTTT GCACCATCTC AGGCAAGATT
CGAATGAATT ACATTCGAAT TCTCCCTGGT GATAAGGTTG TAGTAGAGAT TTCTCCTTAT
GATCTTACCA GGGGTCGCAT TACTTACCGT TATAAGTAA
|
|---|
| Protein sequence | MAKQDAIELE GKVLEPLPNA MFNVELENGK TILCTISGKI RMNYIRILPG DKVVVEISPY
DLTRGRITYR YK
|
|---|
| |