| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1106 |
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| Symbol | |
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| ID | 8413979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1251982 |
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| End bp | 1253268 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022695 |
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| Product | hypothetical protein |
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| Protein accession | YP_003180125 |
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| Protein GI | 257784908 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTTA TCCCTGATCG TCTGCGCCAG AAGATACATA AAACTTTTGG ACCAAAAGAC
CCTGACGAGA AAAGCACTCC ACCAACTGCC ACTTCTGTTA CACGAACCTC ATTTGTTATC
CTGGGCATCT CGGTGGTTGC AGCGCCTGTG ATAGCTACCG TTGCAAATAT TTTGAGTCCA
GGAATTTCTT ATGTTCAGCA GGAATTTTTA CCTCCACAGC TTAATTCAAA GGTTCCAGGC
TATGCCCGTG CGCTGATTCA GCTTGCGCAA CGAGAAGGCT CTCTTAATCT TCTTTGTACT
TCCAAAGAAG CGGTAAAACC CTTGGTAGAA ACATATTCAA GAGCGTTTTC TGTGCCTGTT
ATTGTGGGTG AGGCAACAGA GGAAGAAATT CAAGAGTTTA TTCAGCAAAC ATATGTTGCT
AGTAAGAGTG TGGAGTCTGA AACTTCTGAT ATCAAATTGG ATGTTAATTG GGATTTTGAG
AAACCTGATG TCATTTTCTT AGCAAGCGAA GCTTTAATGC AATGCTTTGA AGCTTCCGCG
TATTGTCAGC CGTATGAAGT TTCTTCAACA GATCAGTACG TACGCTCCGA GTTTTTTGAA
GTCACAGGAC AATGGTATGC CTATGCTGCA GATCCGTTAG TTTTACTTGT GAATCAAGAG
CGTCTTAATG AGAAAAAGAT TCAGCGTCCA CGTGAATGGA CAGATCTTCT TATAGACGGT
CTGCGTGGAA GGTATGTTAT TCCTGATCCT GCACTTACGT ATGTGGGCAA GAAGTTTGAG
TCGCTCTTTT TGGGTCAGTA TGGTCTGGAT AAAGGTACTC AAATTATTCA AAGTTTGTTC
GAAAATGTTG ACGCATTTTC TGAGAGTACA TATCAAGCAA TTAGAGACAC AGGATTTGGT
AAGTACAGAG CCTGTGTTTG TTCACTAAGT GATGCGTATA GGGCAATTAC TAAAGATGAT
TTTGATAATC TCTCAGTTGT TCTGCCGGGT GCTTCTTATT TCTCTACGAT AAGGTCATTT
ATATGTCAGA GGTCAAAACA TACGTATTCA GCATATTTAT GGCAGGAATT TATTACCAAA
CGGGATTCTG CTGAACACAT GGGAGAAATG GACTCGTTTT TCTCGCCAGT TATTGAGGGA
ACGCCAAATC CTTGGTATGC AAGTCGTCTA AATTTGACAG GGGTAAGTGA ATCAATGCAG
ATAGTTCCTG CTCCAACAGA TGCAGAAGGC AATCTGATCA AGCTTGAAGA TGTTCATGCT
GTATACAGTA AGTTGGTTAA AGCGTAG
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| Protein sequence | MKFIPDRLRQ KIHKTFGPKD PDEKSTPPTA TSVTRTSFVI LGISVVAAPV IATVANILSP
GISYVQQEFL PPQLNSKVPG YARALIQLAQ REGSLNLLCT SKEAVKPLVE TYSRAFSVPV
IVGEATEEEI QEFIQQTYVA SKSVESETSD IKLDVNWDFE KPDVIFLASE ALMQCFEASA
YCQPYEVSST DQYVRSEFFE VTGQWYAYAA DPLVLLVNQE RLNEKKIQRP REWTDLLIDG
LRGRYVIPDP ALTYVGKKFE SLFLGQYGLD KGTQIIQSLF ENVDAFSEST YQAIRDTGFG
KYRACVCSLS DAYRAITKDD FDNLSVVLPG ASYFSTIRSF ICQRSKHTYS AYLWQEFITK
RDSAEHMGEM DSFFSPVIEG TPNPWYASRL NLTGVSESMQ IVPAPTDAEG NLIKLEDVHA
VYSKLVKA
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