| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1101 |
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| Symbol | |
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| ID | 8413974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1243687 |
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| End bp | 1245063 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022690 |
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| Product | Na+/H+ antiporter NhaA |
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| Protein accession | YP_003180120 |
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| Protein GI | 257784903 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTA TTTATAGAGA GCCCGCTGTA GTTAGAAGAA TTGGTCAACG CTCTTCTCTA
AAGAAAATTA CTTCTAACAG CACTATTGCG GCAGCAGTTA TGGTGCTTGC AGCGCTTATT
GCACTTGTAG TTGCCAACTC TCCCGCTCAT GAGGTGGTTC GAGAAATTCT AGAAGTTCAA
ATGAGTTTCT CGCTTGGAAT AATCCATGCT CACATGGCGC TAGAGACTTT TGTGAATGAT
TTTCTTATGG CAATCTTCTT CTTGTTGGTG GGTATTGAGC TCAAGTATGA AGTAACTGTT
GGTCAGCTCA GAAAGCCAAG ACAGGCAATG CTTCCTATGC TTGCTGCTGT TGGTGGCGTT
GCAGTTCCTG CCCTTATTTA TTTGGTGCTT AATGCAAGCA CTGCTCCTCA TGGATGGGCA
ACACCAATTG CAACTGATAT TGCCTTTGCG CTTGGTGTTA TGTCACTTTT AGGAAACAGA
ATCAGTCCCC AGACCAAGGT TTTCTTCCAG ACACTTGCTA TTGCTGACGA TATCCTAGCA
ATTGTGGTTA TCGCGCTCTT TTATGGTCAG ACACCAAATA TTGCCTGGTT AGCGGCTTCT
CTTGGTGTAC TTGTTATTTT GTGGGGAATG AATCGTCTAA AGATTTATTC TTCCGGTCCG
TACCTGCTTG TAGGTTTGGT TCTTTGGGTT TGCATGTATC ACTCGGGAAT TCACGCCACT
CTTGCAGGTG TCCTTCTTGC CTTCTTCTTG CCATCTCACT CTGATGTTCG CTTGAGTAAG
TTAGGAAGCT GGCTTTCAAG GCGCGCTCGT GAGCTGGATG ATCATTATGA TGATGAGCAT
CACGTTTTGG GCCAGCACGA CTTTACACAT GGTGCCAACT CAATTGAGCA TGTCATGCAT
CATGTAACTC CACCGCTTCA GCGCGTTGAG CATTATATTT CTGTCTTTGT TAACTTTATT
GTTCTGCCTA TCTTTGCGTT TGTAAACGCA CAGATTACGC TGGTAGGAGC AGATTTTGGT
GCTCTGTTGA GCAGTACTAT TGCACACGGC GTGTTCTTTG GTGCTGTTCT TGGAAAGCCA
CTAGGAATCA TTTTTGTAAC GTTCCTGCTG GTCAAATGTA AGGTTTGCAA ACTTCCTGCA
AAAGTTGATT GGGTTCAGAT TACAGCCGTT GGCCTTATGG GTGGCCTTGG CTTTACCATG
TCAATTCTTA TCTCTAATCT TGCATTCCCA GATGCAGGGG AGATTCTTGC AGCTAAAGTG
GCTGTTCTCG CCGCATCGTT TGCTTCTGCA ATCTTGGGTC TACTATTTGT GCACATCACA
GAGTTTTATA AACACCAAAA GAAGAACAGC TTGAGGGAAG ATGTCGTACA AGAATAA
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| Protein sequence | MSSIYREPAV VRRIGQRSSL KKITSNSTIA AAVMVLAALI ALVVANSPAH EVVREILEVQ
MSFSLGIIHA HMALETFVND FLMAIFFLLV GIELKYEVTV GQLRKPRQAM LPMLAAVGGV
AVPALIYLVL NASTAPHGWA TPIATDIAFA LGVMSLLGNR ISPQTKVFFQ TLAIADDILA
IVVIALFYGQ TPNIAWLAAS LGVLVILWGM NRLKIYSSGP YLLVGLVLWV CMYHSGIHAT
LAGVLLAFFL PSHSDVRLSK LGSWLSRRAR ELDDHYDDEH HVLGQHDFTH GANSIEHVMH
HVTPPLQRVE HYISVFVNFI VLPIFAFVNA QITLVGADFG ALLSSTIAHG VFFGAVLGKP
LGIIFVTFLL VKCKVCKLPA KVDWVQITAV GLMGGLGFTM SILISNLAFP DAGEILAAKV
AVLAASFASA ILGLLFVHIT EFYKHQKKNS LREDVVQE
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