| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1090 |
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| Symbol | |
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| ID | 8413963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1232791 |
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| End bp | 1234344 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022679 |
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| Product | PSP1 domain protein |
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| Protein accession | YP_003180109 |
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| Protein GI | 257784892 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.220883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG TTGTCCCGGT GAAATTTGAA TACGCCGCAC GCGACCTTTG GTTTGATCCA
AAGGAGTCTG GCGTTCTTGA AGGCGACCAC GTCATTTGTC AGACTGAGCG TGGTCTAGAG
ATTGGCCTTG CTATTGCTGA TCCTCGTGAA ATTTCTCAGG AGGAGTTTGA ATACAAGACA
AACAAAGCTG AGCTTAAAGA TGTTGTTCGC GTAGCAACTG AAGAAGATCT TTCTCGCGCA
GAAGAACTTG CCACTAAGGG CGAGGCTGCG CTTCCCATAT TCAGGAAGTT TGTTGTTCAA
GAAGAACTTG AGATGAAGCC TATTGGCGTT GAGTATCTTT TTGATGGCGA GAAGGTCGTT
TGTTACTTCT CAGCTGATGA TCGTGTGGAC TTTAGACAGC TTGTCCGTGA GCTTTCTCAT
GAACTTCATG AGCGTATTGA TATGCGTCAG ATTGGCGTCA GAGAAGAGGC GGCGGTCATT
GGTGGCTATG GTCACTGTGG ACAAGAGCTT TGCTGTAGAA GGTTTGGTCT TTCTTTTGAG
CCAGTTTCTA TTCGTATGGC AAAAGAGCAG GATTTGCCAC TGAACTCCAC TAAGATTTCT
GGTGCTTGTG GCCGCTTAAT GTGCTGCTTG CGCTATGAGT TTGAAGCGTA TCGTGATTTT
AAGAACCGTG CTCCAAAGCG TAATGCTGTT ATTGAGACTC CTTTGGGTAT GGCAAAAATT
GTTGAGTACA ACACACCAAA AGAAGAGATT GCACTTCGTC TTGAGAGCGG CAAAGTAGTC
CGTATTCCTC TTGCTGACAT GGATGCATCT CCTGCAGCAC AGCAGAAGTC GGATGAGCTA
GGTTGTTCTT GCAGACCAGA CAGTGTTTCT CGCGCTGCAC TTGAGCGTCT TGAATCTGTT
GAGGTTCAGA TGGCCCTGGC AGAACTTGAT AAAGCAAACG GTTTGATAGT TGATGAAGAG
CCAGAAATCA ATCCTGACCT CTTTGTTACT GAGGCTCCAA GACGCAAACG TGAGCGCTTT
GAGCAGAGCA ATGCAAATAG GCAGGAAAAT GCGCAGAAGT CTAGCGTAAG AAACACTCGA
GAAGAACAGG GTACTCAAAG CTCTTCTCGC ACCCGTCGTG TAAGAACCTC AAAGAATGCT
CAAGTAAACC CTGGTTCCAG TACTTTTGAT GCCGCAACTG ATACACTGCG TCGCACGCGT
CGCCGTCATC ACGTAACAGA CGATGGTGTC ACAAACACTC AGACACCCCA GAAGAACGAG
CAGAACTCAG CTTCTGCTCA GAAACAGCCT CAGGGCAAGC GTTTTAGAAG GACAGATGCT
CCTCAGAGTG CACAGAGTGC CGATGAGACT CAGGCTCCGG TCCGTACAAA GAGAACTCGC
CGTCCAGGCG ATAGGGCGGG CATGAAGGCC CAAAGTTCTT CACAGAGTGC TTCTGGCTCT
GGCAGTGCAC CTAATGCTGG ATCTGTAGAC GCTCAGTCAC AGAATGCTAC GCGTCGTAGA
CATAGAAGAG CTGGGCGAGA TAATCGTAGC CGCGGTTCAA AGGACAATGC GTAA
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| Protein sequence | MPTVVPVKFE YAARDLWFDP KESGVLEGDH VICQTERGLE IGLAIADPRE ISQEEFEYKT
NKAELKDVVR VATEEDLSRA EELATKGEAA LPIFRKFVVQ EELEMKPIGV EYLFDGEKVV
CYFSADDRVD FRQLVRELSH ELHERIDMRQ IGVREEAAVI GGYGHCGQEL CCRRFGLSFE
PVSIRMAKEQ DLPLNSTKIS GACGRLMCCL RYEFEAYRDF KNRAPKRNAV IETPLGMAKI
VEYNTPKEEI ALRLESGKVV RIPLADMDAS PAAQQKSDEL GCSCRPDSVS RAALERLESV
EVQMALAELD KANGLIVDEE PEINPDLFVT EAPRRKRERF EQSNANRQEN AQKSSVRNTR
EEQGTQSSSR TRRVRTSKNA QVNPGSSTFD AATDTLRRTR RRHHVTDDGV TNTQTPQKNE
QNSASAQKQP QGKRFRRTDA PQSAQSADET QAPVRTKRTR RPGDRAGMKA QSSSQSASGS
GSAPNAGSVD AQSQNATRRR HRRAGRDNRS RGSKDNA
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