| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1089 |
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| Symbol | |
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| ID | 8413962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1232363 |
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| End bp | 1232791 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022678 |
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| Product | 6-pyruvoyl tetrahydropterin synthase |
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| Protein accession | YP_003180108 |
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| Protein GI | 257784891 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.225786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.813307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATACGC TCAAGACCGA ATATGCCTTT GACTCGGCGC ATTTTCTTAC AAACTACTAT
GGCAAGTGCG AAAACCTCCA CGGTCATCGC TGGCACGTAA CTGCTTGTAT TTCCACTGCA
GAACTTGGCG AGTCTGGTAC AGAAAAAGAT ATGGTTATGG ACTTTGGCGT TTTTAAGCGT
AAGGTTGGCG CACTGTGTGA TTCCCTTGAT CATACGTTTT TGATTGAGGA GGGTTCTCTT
TCTGAAAAGA CACTGAACTG TCTTACAGAA GAGGGTTTCT CGCTTACCGT GTTGCCCTTT
AGAACAACAG CAGAAAATTT GGCCAAGTAT TTGTTTGAGC AACTTGAAGC GGAAGGCTTA
CCCGTTTCTT CTGTTGAGGT TGATGAGACA CCCAACAATT GCGCCATTTA TTCAAAAAAT
ATGAATTAA
|
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| Protein sequence | MYTLKTEYAF DSAHFLTNYY GKCENLHGHR WHVTACISTA ELGESGTEKD MVMDFGVFKR
KVGALCDSLD HTFLIEEGSL SEKTLNCLTE EGFSLTVLPF RTTAENLAKY LFEQLEAEGL
PVSSVEVDET PNNCAIYSKN MN
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