| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1088 |
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| Symbol | |
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| ID | 8413961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1231230 |
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| End bp | 1232270 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022677 |
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| Product | glucan 1,3-beta-glucosidase |
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| Protein accession | YP_003180107 |
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| Protein GI | 257784890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.218791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACG GAACATTGCG AGGTGTCAAT TTAACCGGTT GGCTTACGTT TGAACCGTGG
GTAACTCCCG AGCCATTTGC GCGTACAGGC TGTGTTGATG AGGCTCAGCT CATTAAAGCA
TTAGGTGTTG AAGCCTACCA TAATCTTGTT AAAGCGCATC GTTCTTCATT TATTCAGAGC
TCTGACTTTG TGAGCATTGC CGCTCGCGGT TTTAATGCGG CGAGAATTTC TGTGCCTTGG
TATGTTTTTG ACGAAGAAGC CGCTGATACA CCATATGTAA GCTGTATTGC TGAGCTTGAT
AAGGCTCTTG AATGGGCAGA AGAGCTTGGT TTGCATGTTA TTTTTGTACT GGCAGTAAAT
CCAGGATTAC CTGATGGTTT GGACGATCAG CCAGGTGGTG CTCCACGTAC CAGAATTTCT
GGAGAAAAGT CGCTTTCTAT TCTTCATAAA CTTGCCCTTC ATTATGCCCA TCGTAGCGGT
TTTTATGGCA TTGAAGTAGC TGATGAGGTT AAACCTCGCG TGCGCAAGGG TTTTAAGCTA
ACTGATGGTA TTCCTGGTCA TTTACTTAGA AACTATTATC GCCGTGCTTA TGAGGCTATT
AGATCTGTGG CAGGAGAAGA ACCTGTGGTT ATTCTCCCGG ATGGTGGTTG GCCTCAGGGA
TTTAGGCGTT TTATGAGTCA GCAGTCGTAT CAAAATGTTT GGCTTGATGC TCATCTTGAT
AAGCCTTGTG AGGGAATTGA TTGTTCAGGT CCTCGTGGGG TACAGCAGCT CATTGATAAA
AACGAAGCGT ATTTGAAAAC TTCTGCATCA GGAGGTCTAC CCGTAATGGT AGGCAAGTGG
TCTGCATCAC TACCAAACAT CAACGGCGCT ATGACTGCAG AAGGAAGAAT TGCTCTTGAG
CGTATTTACA CCTCTGGCCA GCTTAAAGTG TACAATACGT GTCCTGCATG GTTCTTCCAG
ACCTGGAAGA CCTCTGCATT TTTGGCAGCA TGGGACGCGC GCGTTGCACT GGCAACGTTT
GAGAGGGGAA TGCTCGAGTA A
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| Protein sequence | MAHGTLRGVN LTGWLTFEPW VTPEPFARTG CVDEAQLIKA LGVEAYHNLV KAHRSSFIQS
SDFVSIAARG FNAARISVPW YVFDEEAADT PYVSCIAELD KALEWAEELG LHVIFVLAVN
PGLPDGLDDQ PGGAPRTRIS GEKSLSILHK LALHYAHRSG FYGIEVADEV KPRVRKGFKL
TDGIPGHLLR NYYRRAYEAI RSVAGEEPVV ILPDGGWPQG FRRFMSQQSY QNVWLDAHLD
KPCEGIDCSG PRGVQQLIDK NEAYLKTSAS GGLPVMVGKW SASLPNINGA MTAEGRIALE
RIYTSGQLKV YNTCPAWFFQ TWKTSAFLAA WDARVALATF ERGMLE
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