| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1087 |
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| Symbol | |
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| ID | 8413960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1230325 |
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| End bp | 1231230 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022676 |
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| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
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| Protein accession | YP_003180106 |
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| Protein GI | 257784889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0313] Predicted methyltransferases |
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| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.831254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAT CTACTCTTTC AGCAGGTAAA CTGTCTATTG TGGGCACGCC TATTGGTAAC
CTTTCGGATA CGTCACCGCG CGTTAAAAAA ACGCTTGCAG CAGCAGATGT CATTTTATGT
GAGGACACGC GTGTAACCTC AAAGCTTCTC TCGGCATTTG ACATTCACGT GCCATTGCAG
CGCTGTGATC AAAATATTAT TGAATCGCAA ATTGAACCAA CGCTTGAGAG GATTCGCGTT
GGCCAGCGTG TTGCATTTGT GTCAGATGCA GGTATGCCGG GTATTTCCGA TCCAGGTCAG
CATTTGGTTG ATGCGGCGCT TTCAGAAGGT CTTGCAACGG AGGTTATTCC GGGTCCTTCT
GCGGTAACTT GTGCACTTGT TGCATCGGGC CTGGCGAGTG AACATTTCTT CTTTGAAGGC
TTTTTGCCCA GAAAGCACGG ACAGATTGTA CAGCGTTTGC AGCAACTTGC AGCAATTCCT
GGCACCATTG TGTTGTATGA ATCTCCGTTT AGGGTGCTTG CAACTGTTGA AGCTATAGCC
GAGGTGTTCC CAACTAGGCA GGTGGCTCTT GTTAGAGAGC TCACCAAGCT TCACGAAGAA
GTGGTGCGCG ATGTGGCTTC TCGCCTTGTT AAGGCACTTG CTGCAAAAGA AAACCTCAAA
GGCGAGTGTG TTCTGGTCAT TGCAGCCCCC ACAGAAGAAG AGCTTTCCTC TGCATCATCG
CAGGCAGCGG GCGAGTCTCA GCTCTCGCTC GAAGATGCTA TCCAGGCGGG TCTTGCTGCT
GGCATTAGAA AATCAGCACT GGCCAAGGAG CTTGTTCAGA AGTTTGGTAT TGCGCGTGAT
GAGGCATACC AGGCAATTCT TACTCATGAG GCAAATAGTT TCAGTATGCC TATAAAGATG
CAGTAA
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| Protein sequence | MTESTLSAGK LSIVGTPIGN LSDTSPRVKK TLAAADVILC EDTRVTSKLL SAFDIHVPLQ
RCDQNIIESQ IEPTLERIRV GQRVAFVSDA GMPGISDPGQ HLVDAALSEG LATEVIPGPS
AVTCALVASG LASEHFFFEG FLPRKHGQIV QRLQQLAAIP GTIVLYESPF RVLATVEAIA
EVFPTRQVAL VRELTKLHEE VVRDVASRLV KALAAKENLK GECVLVIAAP TEEELSSASS
QAAGESQLSL EDAIQAGLAA GIRKSALAKE LVQKFGIARD EAYQAILTHE ANSFSMPIKM
Q
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