| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1084 |
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| Symbol | |
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| ID | 8413957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1226952 |
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| End bp | 1227896 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022673 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_003180103 |
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| Protein GI | 257784886 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGAGC ACGCATCGCA TCAGACATCG TGGCTTGCTA ATCAGAGAGC CACTAAAGAA
ACGCTAGAAC GTTTTGGCCT CGCCACTAAA TATAGACTGG GCCAAAATTT CCTAGTGCAA
GACCACATTA TCGAGAAAAT CGTTCAGCTT GCAGAGGTTC GGCCTACCGA TGTGGTCGTC
GAGGTTGGAC CCGGTTTGGG TACCCTCACG GTGGCCTTGC TCGACAACGC TCTTGCGGTC
TGCTCGCTTG AGGCAGACCC TGAGCTTGAG CAAGTCTTAG ACGTAACCTG CAAGGAACCG
CATCCAGACT CGTTTGTACT GGTTATGGGC GATGCGCTGG CAATCACGTC GCAGAAGCTT
GCTGAAGCTT ACGGAGTCCT TCCAGCTGTT GCCCAGAGTG CGATCCCGGT TACCCCGATG
CCAACTAAGT TTGTGTCCAA TCTTCCGTAT CAGGTGGCAG CAACGCTGAT TCTTAAGTTC
TTTCAGGAAC TTCCTTCGCT TGAGCGAGCG GTAGTCATGG TGCAGGCTGA GGTGGCCGAT
AGAATTGCCG CTAAGCCTTC TACCAAGGCA TATGGCGCCT ATACTGCAAA GTTGTCTTTA
TTCGCGCAGG TTACCGGTAG GTTTGAAGTG GGTCCCGGCA ACTTTATGCC GCCACCACGC
GTTAACTCTG CCGTAGTTCG TCTTGATCGC ACGGAGGCGA GAAACCCATT GACTTCTGAG
TTTCTTTCAG AAGAAGAGCT CTTGCATGCC ATGAGGGTTA TTGACGCTGC CTTTGCTCAG
CGTAGAAAGA CCATTCGTAA TTCAATGAGT GCGTCTGGCT TTGATAAAGA CAAGCTAGAC
CAGGCGTTTC TCGCCACAGG AATTGCGCCT ACGGCGCGTG CAGAAGTTTT GACCAGCCAA
GATTTTATTT GTCTTGCAGC TGCTTTGGAG CCTTTGAGTG AGTAA
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| Protein sequence | MSEHASHQTS WLANQRATKE TLERFGLATK YRLGQNFLVQ DHIIEKIVQL AEVRPTDVVV
EVGPGLGTLT VALLDNALAV CSLEADPELE QVLDVTCKEP HPDSFVLVMG DALAITSQKL
AEAYGVLPAV AQSAIPVTPM PTKFVSNLPY QVAATLILKF FQELPSLERA VVMVQAEVAD
RIAAKPSTKA YGAYTAKLSL FAQVTGRFEV GPGNFMPPPR VNSAVVRLDR TEARNPLTSE
FLSEEELLHA MRVIDAAFAQ RRKTIRNSMS ASGFDKDKLD QAFLATGIAP TARAEVLTSQ
DFICLAAALE PLSE
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