| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1082 |
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| Symbol | |
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| ID | 8413955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1225247 |
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| End bp | 1225918 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022671 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003180101 |
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| Protein GI | 257784884 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAAA TCTTAGTTGT AGAAGATGAT CATCAGATTC AGCAAGAGTT GGTACTGTTG
CTACAAAGAA ATGGCTTTGA GGCTCAAGCG CTCACGTCTT TTGAAGCAGT TCCTCAGCAG
ATTATTGCTG CTCACCCAGA TTTGGTTCTT TTGGACTTAA ACCTTCCTGG TATTGACGGA
CAGCAGATTT GTCGAGAAGT ACGACAGCTC TCAAACGTTC CTATTATTGT TGTTACTAGT
AGAAATACTG ATCTTGATGA GCTTATGGTG CTCTCGTTAG GGGCGGATGA TTTTATTGCC
AAGCCTTATA ACACACAGAT TTTGCTCATG CATATTACTT CAGTACTGAG GCGCACAAAT
AGCGATGTTA CAACAGGAGC ACAACTTTCA CATGCAGGTG TAACGCTTGA TTCTTCTTCA
TGCAAGGTTT CTGCAAATCA GAAGAGTGTT GAGCTAACCA AAAACGAGCT CAGAATACTT
TCCCTTTTGA TGCAAAATGC AGGGACAGTT GTTTCTCGCC AGAGAATTCA AGAAGAGCTG
TGGCAATCGG ATGAGTTTGT TGATGATAAT ACGCTGACAG TAAACATCAG CCACCTCAGA
AATACTTTGG CAAGCATTGG CGTTGAAGAT TTTGTTATGA CGCGCCGCGG ACTTGGCTAT
GTTATCGAGT AG
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| Protein sequence | MTKILVVEDD HQIQQELVLL LQRNGFEAQA LTSFEAVPQQ IIAAHPDLVL LDLNLPGIDG
QQICREVRQL SNVPIIVVTS RNTDLDELMV LSLGADDFIA KPYNTQILLM HITSVLRRTN
SDVTTGAQLS HAGVTLDSSS CKVSANQKSV ELTKNELRIL SLLMQNAGTV VSRQRIQEEL
WQSDEFVDDN TLTVNISHLR NTLASIGVED FVMTRRGLGY VIE
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