| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1081 |
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| Symbol | |
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| ID | 8413954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1224200 |
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| End bp | 1225240 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022670 |
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| Product | histidine kinase |
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| Protein accession | YP_003180100 |
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| Protein GI | 257784883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTC TTAAGTATTT AAAAAATCGA ACTATTTTCT TTCTTGCGCT CATAGTAAGC
AGCACGTTAA TTGGCTTTAT GCTTAAAGGC ATCGGACTTA ACGTGTTTGC TATTGCTTAC
TGTATTTTGG TTTTATGGGT AATAGGAGCG GCTGCACTTC TTGCTGATTA TTTTCATCGT
CGTTGGTTTT ACCAGCAGCT TGCTGATAAT TTAGCAGCAA CTGACAAAGA GAGTTACCTG
GTTCCTACTA TGCTGGACGA ACCTTCAACG CTTGAGGAGA GACTTTTTAG AGATGCGCTT
TCAAGCATGT CTAAGTCTAT GATGGACAAG CTTGCTGATG AGCATATGCG ATCAAAGGAA
TATCGCGAGT ATATTGAGAT GTGGGTACAT GAAATCAAGA CACCCATCGC TGCAGCTCAT
TTAGTTGCTC AGAATAATCC TTCTTTGCCC ATGGACGATG TACAGACGCA GCTAACTAAA
ATTGAATCGC TGATAGAGCA GGCTCTCTTT TATGCGCGCA GTGCATCTGT GGATCGAGAT
TTTTCTATTA GAGATGTTAA CTTGCAGCTC ATTGTTAAAG ATGCTCTTAA AAACAATACA
CGTGTTTTTA TTGATGCAGG TGTTTCTCCG CATTTTGATG ATTTGGATCA TGTGGTAAAA
GCTGATCCAA AGTGGCTTGA GTTTATTTTG CGACAGCTTC TGGTTAATGC AGCAAAGTAT
TCAAATCCGG AGCTAGCACC TGGCGAGAAG AACGTTTGGA TTTCTACGTC CGTCTCAGAA
CCACGTGAGG GAACCACTTC GACAACTCTT TTTATTAAGG ATAATGGTAT CGGTATCCCT
GAAGAGGATC TTTCTCGTAT TTTTGATAAG GGATTTACCG GTCAAAATGG ACGCAAGTAC
GCCAAATCTA CCGGCATGGG TCTCTATCTT TGTTATGAGC TCTGTAAAAA GATGGGCCTT
AAACTTGCTG TGAGCAGTAC TGTTGGTAAA GGCTCAATCT TTTCTATTAC GTTTAATCAG
TCCTTTACCG ATTTGCATTA A
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| Protein sequence | MSLLKYLKNR TIFFLALIVS STLIGFMLKG IGLNVFAIAY CILVLWVIGA AALLADYFHR
RWFYQQLADN LAATDKESYL VPTMLDEPST LEERLFRDAL SSMSKSMMDK LADEHMRSKE
YREYIEMWVH EIKTPIAAAH LVAQNNPSLP MDDVQTQLTK IESLIEQALF YARSASVDRD
FSIRDVNLQL IVKDALKNNT RVFIDAGVSP HFDDLDHVVK ADPKWLEFIL RQLLVNAAKY
SNPELAPGEK NVWISTSVSE PREGTTSTTL FIKDNGIGIP EEDLSRIFDK GFTGQNGRKY
AKSTGMGLYL CYELCKKMGL KLAVSSTVGK GSIFSITFNQ SFTDLH
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