| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1079 |
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| Symbol | |
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| ID | 8413952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1222212 |
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| End bp | 1223042 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022668 |
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| Product | ABC transporter related |
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| Protein accession | YP_003180098 |
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| Protein GI | 257784881 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTA TTCAATCAGT TCCAACTCAG CCAACTGTTG TGGCTGGACA ATCTTCAGCA
CTTACCCCTC ATACCGTTTT GGTTTGCCAA AACCTCGAGA AGTACTATGG AACTCGTGGA
AATATTACTA AGGCACTGGA CGGCATTAAT CTTTCTGTAG CTCGTGGCGA GTTCATTGCC
ATCATGGGTC CTTCCGGTTC GGGCAAAACT ACGCTTTTGA ACTGCATCTC TACTATTGAT
CAGGCATCTG CAGGCCATAT CTTTATTGAT GACCAAGAGC TTTCCAGCCT GCGCGGCTCT
GAGCTTTCTG CCTTTAGGCG TGACCGCTTG GGCTTCATTT TCCAGGATGC AAATCTCCTT
GACACTCTTA CTGCTCGAGA GAACATTGCC CTATCTTTGA CTATTGGACA TATTCGCGCA
CAAGAAGTTT TGGAACGCGT TGATGTTGTT GCTAAATTAC TTCAGATTAC TGATGTATTA
GATAAGTTTC CTTATGAGAT GTCTGGCGGT CAGCGTCAGC GTGTTGCAGC TGCACGAGCT
ATTGTGACTA ATCCATCTCT TGTGTTAGCA GATGAGCCAA CGGGTGCGTT GGACTCAAAG
AATGCACGCA CACTTCTGGA AAGCTTTGAA GGTTTAAATC GTGAAGGCGC AACTATTGCC
ATGGTTACTC ACGACTCTTA TGCAGCTTCT TACGCTCATC GCGTCATTTT TATTAAGGAT
GGTCGTATTT TTAATGAGAT AGTTCGTGGT GAAAAATCTA GGAAACAATT CTTTGATCAG
ATTATGGATG TTGTTTCATT CTTGGGAGGA GAGGGTGCTG ATGTACAGTA A
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| Protein sequence | MSAIQSVPTQ PTVVAGQSSA LTPHTVLVCQ NLEKYYGTRG NITKALDGIN LSVARGEFIA
IMGPSGSGKT TLLNCISTID QASAGHIFID DQELSSLRGS ELSAFRRDRL GFIFQDANLL
DTLTARENIA LSLTIGHIRA QEVLERVDVV AKLLQITDVL DKFPYEMSGG QRQRVAAARA
IVTNPSLVLA DEPTGALDSK NARTLLESFE GLNREGATIA MVTHDSYAAS YAHRVIFIKD
GRIFNEIVRG EKSRKQFFDQ IMDVVSFLGG EGADVQ
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