| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1077 |
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| Symbol | |
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| ID | 8413950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1219410 |
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| End bp | 1219973 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022666 |
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| Product | PTS system, glucose subfamily, IIA subunit |
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| Protein accession | YP_003180096 |
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| Protein GI | 257784879 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCTTT GGTCAAAGGT TAAAAATGTG TTTGTTCCCT CTAATGGAAC TGAAGAGCCT
CAGAAAGCCA CATTTGCTAC CAGGGAAGAT ACAATTTATG CACCAATTTC TGGCGTTTTG
GTAAGCGTTC AAGAGGTACA TGACGAGGTA ATTTCAAGTG GTCTTTTTGG TCAAGGTTAC
GGTATTTTGC CTGTTGGTCT TGATTGTGTA TATGCTCCTT GTGATGCTCG CGTTACCGCA
ACTAATGTAA CTAATCATTC AATTGGTCTT ACCACTGATA CTGGTATTGA GATTCTGATT
CACATTGGCG TTGGTACCAT TGAGATGAAC GGTAAGGGTT TTACCCGTTA CGTTCACGCT
AATGATGAGG TTAAAGCAGG TATGCCACTG ATTTCGTTTG ATTCTGCTGC CATTGAAGAA
GCGGGATATG AGAACGTTGT AGTTGTTACC GTTGTCAACG CAGATACGTA CGAGCGCATT
GACCTTATCG GTGAATCCGG AACGCTGATT GGTGGTCGTC CGCTGGTTAA GATTGGCGAT
CCTTTGATGT GCGTCAAGCA CTAG
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| Protein sequence | MGLWSKVKNV FVPSNGTEEP QKATFATRED TIYAPISGVL VSVQEVHDEV ISSGLFGQGY
GILPVGLDCV YAPCDARVTA TNVTNHSIGL TTDTGIEILI HIGVGTIEMN GKGFTRYVHA
NDEVKAGMPL ISFDSAAIEE AGYENVVVVT VVNADTYERI DLIGESGTLI GGRPLVKIGD
PLMCVKH
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