| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1073 |
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| Symbol | |
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| ID | 8413946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1215391 |
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| End bp | 1216224 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022662 |
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| Product | glutamate racemase |
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| Protein accession | YP_003180092 |
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| Protein GI | 257784875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTC GTCTGACTCC TCATAGTTTT ATTGGTGTTT TTGACTCGGG CGTTGGCGGC
ATGAGCGTGC TTAAGCATCT TGTTGCTCAA ATGCCTCATG AGACGTTTCA TTATTTTGGT
GATTCTGCAT TTGCTCCTTA TGGCACTAAG CCAAAAGAGC AGATTGCACA GCGTTCGTCT
GTTATTGCTA AAAAGTTTAT TGATGAGGGT GCTAAAGCAC TGGTTATAGC CTGCAATACC
GCAACAGCTG CTGCCGCAGA CGAACTGAGG GCAGCCTATC CTTATCTATC TATTGTGGGT
GTTGAGCCGG CTCTTAAGCC TGCAGTGACT GCGTATCCTC ATGGAACTGT GATTGTTCTA
GCTACAAAGG CAACACTTTC TTTACAGAAG TATCACAATC TTGAGTCGCG ATTACATCCT
TCCGCAAAGG TTATCTCTAT TCCAGGAGAA GGCTTGGTAG AGCTTATTGA ATCTGGTCAG
ACTGATTCAG AACAGTTGCA CAAACGACTG ACTGAGCTTT TAGGTGGCTA TACTGGTCAG
GTAGATGCTG TGGTTCTTGG TTGTACGCAT TACCCTTTTA TTAAGAAGCA AATTAGCTCT
GTTTTAGGCA ACGTAGAATT TTTTGATGGC GGTGCAGGAG CCGCTCATCA GCTTAAACGT
TTGCTAAAGC AGGCAAATCT GCTTACTTCT AAAGAAAACA TTGAGGATAC CACTACAGAT
ACCATTGCGA ATGAGAACGA CAGCATCGTA CGACCAGATA TTTTATTCTC ATCAAGCATT
GACACTCCTG AAGAATTGGC ATTCTACCAG GAGTTCTTCT CGCAAGAGAT GTAG
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| Protein sequence | MEARLTPHSF IGVFDSGVGG MSVLKHLVAQ MPHETFHYFG DSAFAPYGTK PKEQIAQRSS
VIAKKFIDEG AKALVIACNT ATAAAADELR AAYPYLSIVG VEPALKPAVT AYPHGTVIVL
ATKATLSLQK YHNLESRLHP SAKVISIPGE GLVELIESGQ TDSEQLHKRL TELLGGYTGQ
VDAVVLGCTH YPFIKKQISS VLGNVEFFDG GAGAAHQLKR LLKQANLLTS KENIEDTTTD
TIANENDSIV RPDILFSSSI DTPEELAFYQ EFFSQEM
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