| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1066 |
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| Symbol | |
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| ID | 8413939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1209924 |
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| End bp | 1210406 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022655 |
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| Product | PTS system, mannose/fructose/sorbose family, IIB subunit |
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| Protein accession | YP_003180085 |
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| Protein GI | 257784868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
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| TIGRFAM ID | [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAC CAGATATCAA GCTTGCTCGA ATTGATAACC GTTTAATTCA CGGCCAGGTT
GCCACTCAGT GGAACGGCAC CCTTGGTACC AATCTTATCC TTGTTGCAAA TGATGAGGTT
GCAGGAAATA AGATGCGTCA GGGTCTTATG GACATGGCTG CACCAAGCGG TGTTGCAACT
AGGTATTTTA CGCTTCAGAA AACCATTGAT GTTATTCACA AGGCTTCTGC AAGTCAGCAC
ATTTTCTTAG TTGCCGAGAA TCCAGAGGAT GTCCTCACTC TGGTCAAGGG CGGTGTTCCT
ATCAAAAAGG TGAACATCGG CAATATGCAC ATGGCTGAGG GAAAGCGACA GGTCGCCACA
AGTGTGGCGG TAGACGATAA GGACGTCGCT GCCTTCCGTG AGCTTCAGGA ATTGGGGGTG
ACTCTAGAGA TTAGGCGTGT TCCTACGACC CCGGTCGAGG ATATCTCAAA GCTATTCGAG
TAA
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| Protein sequence | MGEPDIKLAR IDNRLIHGQV ATQWNGTLGT NLILVANDEV AGNKMRQGLM DMAAPSGVAT
RYFTLQKTID VIHKASASQH IFLVAENPED VLTLVKGGVP IKKVNIGNMH MAEGKRQVAT
SVAVDDKDVA AFRELQELGV TLEIRRVPTT PVEDISKLFE
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