| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1065 |
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| Symbol | |
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| ID | 8413938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1208979 |
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| End bp | 1209785 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022654 |
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| Product | phosphotransferase system PTS sorbose-specific IIC subunit |
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| Protein accession | YP_003180084 |
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| Protein GI | 257784867 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.424224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGTTA GCCCTATTCA GGTGTTATTA ATTTTCATCG TTGCGTTTAT CGCTGGCATC
GATCAGTTTA GTTTCCTCGA GTCTCTTTAC CAGCCAATCG TAACTGGTTT TTTGGTTGGT
TTGATTCTTG GCGACGTTCA GACTGGTCTC ATTGTTGGTG GTACCTATCA GCTTATGACC
ATCGGTAACA TGCCTGTTGG TGGTGCACAG CCACCTAATG CTGTTATCGG CGGCATTATG
TCTGCAGTCT TTGCAATCAC TACTAAGCTT GAGCCAATGG CTGCTGTAGC TGCAGCAATT
CCATTCTCGC TGCTTGGTCA GTATGCAGTA ACCATCATCT TTACTATTAT GTCCCCTGTA
ATGGCAACTG CTGATGCATA TGCCGAGAAG GCAGATCCTA AGGGAATTGC TCGTATTAAC
TACGGCGCAA TGGCTGCCCT TGGTCTTTTC TTCGGTGTTA TTGTTACCCT GTTCTTCCTG
GGCGGTGCTG CATTTGGCAC TCAGATCACC ACTGCAATTC CAAAGTGGCT CATGAATGCA
CTGTCCGTCG CTGGTGGCAT GATGCGCTTC GTCGGCTTTG CAATCCTGCT GAAGGTTATG
GTTTCTCGCG AGCTCTGGGG CTTCTTCCTC ATGGGCTTTG CAGCCGCAAT CGTATTTATC
AGCATTCCTG AGCTCTCTGG TCCAGCACTT CTGCTTCTTG CTCTCATTGG CTTTGGTATC
GCATTCTGGG ATTACCAGCT CCAGACCAAG ATGAAGAATG CTGCTCCTGC TGTTGTTGCT
GGAGGTGACT TCGAAGATGG CATTTAA
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| Protein sequence | MDVSPIQVLL IFIVAFIAGI DQFSFLESLY QPIVTGFLVG LILGDVQTGL IVGGTYQLMT
IGNMPVGGAQ PPNAVIGGIM SAVFAITTKL EPMAAVAAAI PFSLLGQYAV TIIFTIMSPV
MATADAYAEK ADPKGIARIN YGAMAALGLF FGVIVTLFFL GGAAFGTQIT TAIPKWLMNA
LSVAGGMMRF VGFAILLKVM VSRELWGFFL MGFAAAIVFI SIPELSGPAL LLLALIGFGI
AFWDYQLQTK MKNAAPAVVA GGDFEDGI
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