| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1064 |
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| Symbol | |
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| ID | 8413937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1207910 |
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| End bp | 1208989 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022653 |
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| Product | PTS system mannose/fructose/sorbose family IID component |
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| Protein accession | YP_003180083 |
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| Protein GI | 257784866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.309929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTA ATATTCCTGA TACCTATCAG AACACCACTC CTGCTGAGCC ACTTGATCAG
AAGACACTCA ACAAGATGGT GTGGCGTTCC CTGTTCCTGC AGGCTTCCTT CAATTACGAA
AGAATGCAGG CAGCTGGTTG GCTTTACGGT ATCCTTCCAG GTCTTGAGAA GATTCACGGC
GACAACAAGG ATGACCTTGC TGCTTCCATG AGTCACAACC TTGAGTTCTT TAATACCCAC
CCATTTTTGG TTACTTTTGT TATGGGTATT GTTCTCTCTC TTGAGCAGAA CAAGCTGGAT
ATTCCAACCA TTCGTGCAGT CCGCGTTTCT GCAATGGGTC CTCTAGGTGG CATTGGTGAC
GCACTGTTCT GGTTCACTCT TGTTCCAATT ACTGCTGGTA TTACCTCTAA TATGGCAATC
TCTGGCAACG TCTTTGCGCC ATTTTTGTTC CTCATCATCT TCAATATTGC ACAGTTTGCT
GTACGTTATT GGCTGATGAA CCTTTCCTAC AAGATGGGCA CTGATGCAAT TACCCTGCTT
ACCGAGAATG CAAAAGAGTT CACTCGTGCT GCTTCTATCT TGGGTGTCTT TGTTGTTGGT
TGCTTGGTTG TTTGCTACGG CGGAACCAAG CTTGGCGTTG GCGCAAACAT CCCTAACGGT
GAGACACACA GTGTTGTTCT TTCTCAGGTA ACTCTTTCTG ATGAGCAGCT TGCTTCTGGT
CAGTATGACA AGGTACTCTT TGCTGAGGGC AGCTATGCAG ACTACAAGAA GAATCCTGAG
TCCGTTAAGT TCCTCGGTGG CAAAACTGCT GACGGCAAGG ATGGCACCGC TGCTATTACT
CCAGTCGGCA ACGGCGTTAA CCTGGTAACT ATTGGCAAGG AAGTCACTTC TCCTGTCTCT
ATTGACATTC AGAAGATTCT TGACGGCGTT TGTCCAAAGC TTATTCCATT GGCTCTTACC
CTTTGCTTGT ACTATCTCAT GGCAAAGCGT AACTGGACTC CAATTATGTG CATCTGCCTT
CTTCTGGTAA TTGCACTCCT TGGCTCTGGC TTTGGTGTTC TCCCATATAT TTGGGGGTAA
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| Protein sequence | MAFNIPDTYQ NTTPAEPLDQ KTLNKMVWRS LFLQASFNYE RMQAAGWLYG ILPGLEKIHG
DNKDDLAASM SHNLEFFNTH PFLVTFVMGI VLSLEQNKLD IPTIRAVRVS AMGPLGGIGD
ALFWFTLVPI TAGITSNMAI SGNVFAPFLF LIIFNIAQFA VRYWLMNLSY KMGTDAITLL
TENAKEFTRA ASILGVFVVG CLVVCYGGTK LGVGANIPNG ETHSVVLSQV TLSDEQLASG
QYDKVLFAEG SYADYKKNPE SVKFLGGKTA DGKDGTAAIT PVGNGVNLVT IGKEVTSPVS
IDIQKILDGV CPKLIPLALT LCLYYLMAKR NWTPIMCICL LLVIALLGSG FGVLPYIWG
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