| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1061 |
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| Symbol | |
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| ID | 8413934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1204714 |
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| End bp | 1205880 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022650 |
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| Product | N-acetylglucosamine-6-phosphate deacetylase |
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| Protein accession | YP_003180080 |
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| Protein GI | 257784863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.346962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACAT TTGCAGTTAA AGCAGATAAG TTCTTTTTAC CAGGAGCAAC TTCTGGTCCA
GGATATTTGC TCGTCGAAGA CGGCATATTT GGTCATTTCA CTAAAGAAAA GCCAGAGTGT
GAGATTATTG ACCGCACCGG TTCTTGGGTA GCTCCTGGTC TTGTTGATAC GCATATCCAC
GGTTTTCTCG ACCATGACAT TATGGATTGC GATCCTGACG GCGTCATTGA GATTGCTCAG
GGTCTGCTCT CTAATGGCGT AACTTCTTGG CTTCCCACAA CACTGACCGC AAGCGTTGAG
CAGACTGGTG ATGCTTGTGA GTCCGTTGCT GACGCAGCAG AGGGAATTGC GGCAAATGGT
ATTGATGCTG CTCGCATCCA GGGAATCTTT CTAGAGGGAC CATTCTTTAC CGAGAAGCAC
AAGGGAGCTC AAAATCCTGC GTACTTTCTT GACCCAGATG TGGATGTCTT TGATGAATGG
CAGGAGCGCG CTGATGGTTG GATTGCCAAG ATAGCTATTG CTCCAGAGCG CGATGGTGCT
CCAGAGTTCT GTGCAGAGAT GGCAGACCGT GGTGTTCATG TAGCCTTGGG ACACTCTGAT
GCAACTTTTG AAGAGGCTCT TGCATGTGTA AATGCTGGTG CTGATATCTT TGTTCATACT
TATAACGGCA TGAGTGGTCT TCACCATCGT GAGCCGGGTA TGGTGGGCGC TGCAATGACT
ACCCACGGTA CTTATGCAGA GGCAATTTGC GACGGTCACC ACCTTAATCC TATTGCAGTT
CGCGCTCTTG TGAATGCAAA GGGAGCAGAT CATACCGTTC TCATTACCGA TTGCATGCGC
GCAGGCGGTA TGCCTAATGG TCAGTACAAT CTTGGTGATT TCCCCGTTGT TGTTGAAGGT
GGGACTGCTC GCCTGATGGA TGACTCTCAC AGTCTTGCTG GCTCAATCCT TCGTCTGTTT
GAAGGCGTAA AGAACGTCTA TGACTGGGGA GTTGTATCTG CTGAAGAGGC AGTTCGCATG
GCTTCAGAAA ACCCAGCTCG CTCCTGTGGA ATTGATGATG TTTGCGGCTT TATTCGTCCT
GGATACGATG CAGACTTTAT TGTTATTACT AAGAATCTTC AACTTGAAGA GACGTTCCTT
GGTGGAAAGA GTGTCTACAA GGCTTAA
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| Protein sequence | MSTFAVKADK FFLPGATSGP GYLLVEDGIF GHFTKEKPEC EIIDRTGSWV APGLVDTHIH
GFLDHDIMDC DPDGVIEIAQ GLLSNGVTSW LPTTLTASVE QTGDACESVA DAAEGIAANG
IDAARIQGIF LEGPFFTEKH KGAQNPAYFL DPDVDVFDEW QERADGWIAK IAIAPERDGA
PEFCAEMADR GVHVALGHSD ATFEEALACV NAGADIFVHT YNGMSGLHHR EPGMVGAAMT
THGTYAEAIC DGHHLNPIAV RALVNAKGAD HTVLITDCMR AGGMPNGQYN LGDFPVVVEG
GTARLMDDSH SLAGSILRLF EGVKNVYDWG VVSAEEAVRM ASENPARSCG IDDVCGFIRP
GYDADFIVIT KNLQLEETFL GGKSVYKA
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