| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1059 |
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| Symbol | |
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| ID | 8413932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1203579 |
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| End bp | 1204226 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645022648 |
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| Product | protein of unknown function DUF421 |
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| Protein accession | YP_003180078 |
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| Protein GI | 257784861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2323] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTT ATTTAGAGGT TGCAATTAAA TTGTGCATCG GTCTTTTCTC GCTTGTTTTG
GCAATTAACG TCAGCGGAAA AGGAAACTTA GCACCAACTG CAGCAATTGA CCAGGTTCAA
AACTTTGTAC TTGGTGGTAT TGTTGGCGGC ATGATTTATA ACAGTTCAAT TACTATTTTG
CAGTACACCC TTGTTCTGCT TATTTGGCTC ATTATTGTTA TGGTTCTCAA ATGGCTAAGA
ACTAACAATA TGTTGGTCAA GCAGTTGATT GATGGACGTC CTGTTATTGT TATCGATAAG
GGCAAGTTGC TTGTAGACAA TTGTAGGTCT ATGGGACTAA CTGCTTATGA TGTGTCACTT
AAGCTACGCC AAGCAGGTGT GAATTACACT TCAGAAGTTA AACGCGCTAT TCTTGAGCAA
AATGGACAGC TTATTATTGT TCAGCATGGA GAAGAGAACG TTAAGTTTCC ACTTATTACT
GATGGACAAG TCCAGACAAA CATTCTTGAG GCGCTTGATT TAGAAGAGAA TTGGCTTGGT
AAGGAACTTC AGCGTCAAGG TTATGAGTCT CCTTCAGAGA TTTATTTGGC TGAATACAGC
AGTGGTAATT TAATTATTAC TCCGTATACA GAGAGATCAG TAGGTTAG
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| Protein sequence | MNFYLEVAIK LCIGLFSLVL AINVSGKGNL APTAAIDQVQ NFVLGGIVGG MIYNSSITIL
QYTLVLLIWL IIVMVLKWLR TNNMLVKQLI DGRPVIVIDK GKLLVDNCRS MGLTAYDVSL
KLRQAGVNYT SEVKRAILEQ NGQLIIVQHG EENVKFPLIT DGQVQTNILE ALDLEENWLG
KELQRQGYES PSEIYLAEYS SGNLIITPYT ERSVG
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