| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1041 |
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| Symbol | |
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| ID | 8413914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1176037 |
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| End bp | 1177770 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022630 |
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| Product | ABC transporter related |
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| Protein accession | YP_003180060 |
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| Protein GI | 257784843 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATCTG TCTTAAAAAT GTACTTTCAG TTTGGAAGCT CTTATCGCCA GAAACTCTAC
AAAGGTCTTT TCTTTACCAT TCTTGGTTGC CTTTTTGAAG GCGTACAAAT AACGGCGCTT
TGGATCGTTT TTACCGCTCT TACTACTAAC ACACTCTCAA CCCAGACGAT ATTTTCTGCA
CTGGGAGTAA TGCTTTTAAG CATTATGGGG ACGTTCGTTT GCGCTCACTT TAAGAGTGAG
AATTTCTGTG ATGCTAATTT CAGTATGGCT GGTGCAAAGC GTGCAGAAAT TGGAGATACA
TTACGTCGCC TTCCTATGGG TTATTTTAAC GAGAATAGCC TTGGAGAAGT AACAGCTGTT
ATGACTAATC AGCTTGACGT AATGCAAAAT CTTGGTGGTC TGCTTTATAT GATGGTTGTT
GGAGGTTTGG CTTTAACAGC AATTATTGTT GCATTCTTGT TCGTGTTCTG TTGGCAATTA
GGTCTTATAA CTGCAGCTAC TTTTGTTTTC TTCTGTATAA CAATGGAGCT GCTTCAGGCT
TACGTACGTA ATACATCAGA TGATTATGTG GCTGCCAACA CTACCTTGAT CAGCTCCGTA
CTTGAGTATG TCCGTGGCAT TAATGTGGTA AGGTCATTTT CTCTTATTGA CGATGCTGAG
GGAAAATATG CCAAAGCTGT TGATGATTGT CGTGTTCAAG CACTCAAACT TGAATTTAAG
GCACTTCGTT TCTCAGTTCT GCAAATGGTT GTTTCTAAGG CTACCAGCGT TATTATGTGC
TTGGTATCAG TTGAATTATG GCTATCGGGA ACACTTGATA CAGCTTCTTG TTTGACGGTA
GTAGTTATGT CATTTATGTT GTTTAGTCGC TTAGAATCAG CTGGTCGTTT CTCAACTATT
TTACGCAACC TTGAAATTGC AATGGAGCAA ACAAATGCTA TTCTCGCTAC TCCTGCAATG
GAGGAGGGAG AAGGTCTTGA GGAAGCGGCA TCCTGTGACA TAGAGCTTTC TCATGTGTCG
TTTGGCTACG ACGATAGGCA AATTCTCGAA GATGTAAGCC TTTCTATTCC TGCGGGTACT
TCTTGCGCAA TTGTAGGACC AAGTGGATCT GGCAAAACAA CGCTTGTCCG TCTTATTGAG
CGTTTTTGGG ATGTGAATAC AGGACAAGTG TCACTTGGTG GACACGATGT ACGCGACTAT
AAGGTTGATG CTCTTCTTCA AAATTTCTCT ACCGTTTTTC AGGGAGTATT TCTTTTTGAT
GACACTATTG AGAACAACAT TAAGTTTGGT AATCCAAGTG CAACTCATGA GCAAGTAGTC
GATGCAGCTA GGCGCGCCTG TTGTGAGGAG TTTATCCAGG CATTACCTAA TGGATATGAA
ACACGCTTAG GTGAAGGTGG TTCAATGCTT TCTGGTGGCG AGCGCCAGCG TCTTTCTATT
GCGCGTGCCA TCTTAAAAGA TGCACCGATT GTTGTACTTG ATGAGGCTAC GGCTAATGTT
GATCCGGAAA ATGAACTTGA GTTGCAGCAT GCAATTGCAG AGCTCACAAA GTCAAAGACT
GTCATTATGA TTGCTCATCG CTTAAAGACA GTTCGCAATG CAGATCAGAT ACTTGTGTTA
GATAAAGGTC GTATTGTGCA AAGAGGCACT CACGAATCTC TCATGGCAGA GGGCGGTATT
TACGCTGATT TTGTTAACAT GCGCGAGAAA ACCGTTGGCT GGAAAATTGC ATAG
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| Protein sequence | MLSVLKMYFQ FGSSYRQKLY KGLFFTILGC LFEGVQITAL WIVFTALTTN TLSTQTIFSA
LGVMLLSIMG TFVCAHFKSE NFCDANFSMA GAKRAEIGDT LRRLPMGYFN ENSLGEVTAV
MTNQLDVMQN LGGLLYMMVV GGLALTAIIV AFLFVFCWQL GLITAATFVF FCITMELLQA
YVRNTSDDYV AANTTLISSV LEYVRGINVV RSFSLIDDAE GKYAKAVDDC RVQALKLEFK
ALRFSVLQMV VSKATSVIMC LVSVELWLSG TLDTASCLTV VVMSFMLFSR LESAGRFSTI
LRNLEIAMEQ TNAILATPAM EEGEGLEEAA SCDIELSHVS FGYDDRQILE DVSLSIPAGT
SCAIVGPSGS GKTTLVRLIE RFWDVNTGQV SLGGHDVRDY KVDALLQNFS TVFQGVFLFD
DTIENNIKFG NPSATHEQVV DAARRACCEE FIQALPNGYE TRLGEGGSML SGGERQRLSI
ARAILKDAPI VVLDEATANV DPENELELQH AIAELTKSKT VIMIAHRLKT VRNADQILVL
DKGRIVQRGT HESLMAEGGI YADFVNMREK TVGWKIA
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